U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

xkr4 XK related 4 [ Oryzias latipes (Japanese medaka) ]

Gene ID: 101174456, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
xkr4
Gene description
XK related 4
See related
EnsemblRapid:ENSORLG00000004273
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias latipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 17
Exon count:
4
Annotation release Status Assembly Chr Location
103 current ASM223467v1 (GCF_002234675.1) 17 NC_019875.2 (5084186..5105309)
102 previous assembly ASM31367v1 (GCF_000313675.1) 17 NC_019875.1 (5042845..5063629)

Chromosome 17 - NC_019875.2Genomic Context describing neighboring genes Neighboring gene potassium voltage-gated channel subfamily B member 2-like Neighboring gene E3 ubiquitin-protein ligase RNF31 Neighboring gene transmembrane protein 68 Neighboring gene trimethylguanosine synthase 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in apoptotic process involved in development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in engulfment of apoptotic cell IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylserine exposure on apoptotic cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
XK-related protein 4

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM223467v1 Primary Assembly

Genomic

  1. NC_019875.2 Reference ASM223467v1 Primary Assembly

    Range
    5084186..5105309
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004078622.4 → XP_004078670.3  XK-related protein 4

    UniProtKB/TrEMBL
    A0A3P9K4Z4, H2LH92
    Related
    ENSORLP00000005348.2, ENSORLT00000005349.3
    Conserved Domains (1) summary
    pfam09815
    Location:95 → 478
    XK-related; XK-related protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials