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otud3 OTU deubiquitinase 3 [ Oryzias latipes (Japanese medaka) ]

Gene ID: 101170512, updated on 8-Mar-2024

Summary

Gene symbol
otud3
Gene description
OTU deubiquitinase 3
See related
EnsemblRapid:ENSORLG00000000274
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias latipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
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Genomic context

Location:
chromosome: 7
Exon count:
11
Annotation release Status Assembly Chr Location
103 current ASM223467v1 (GCF_002234675.1) 7 NC_019865.2 (932651..936190)
102 previous assembly ASM31367v1 (GCF_000313675.1) 7 NC_019865.1 (140891..144431)

Chromosome 7 - NC_019865.2Genomic Context describing neighboring genes Neighboring gene succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial Neighboring gene uncharacterized protein K02A2.6-like Neighboring gene transmembrane protein 240a Neighboring gene BCAS2 pre-mRNA processing factor Neighboring gene tripartite motif containing 33

Genomic regions, transcripts, and products

General protein information

Preferred Names
OTU domain-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM223467v1 Primary Assembly

Genomic

  1. NC_019865.2 Reference ASM223467v1 Primary Assembly

    Range
    932651..936190
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004070223.4XP_004070271.1  OTU domain-containing protein 3

    See identical proteins and their annotated locations for XP_004070271.1

    UniProtKB/TrEMBL
    A0A3P9KBN7, H2L3L0
    Related
    ENSORLP00000000334.2, ENSORLT00000000334.3
    Conserved Domains (1) summary
    cl19932
    Location:66152
    OTU; OTU-like cysteine protease
  2. XM_011476659.3XP_011474961.1  OTU domain-containing protein 3

    See identical proteins and their annotated locations for XP_011474961.1

    UniProtKB/TrEMBL
    A0A3P9KBN7, H2L3L0
    Conserved Domains (1) summary
    cl19932
    Location:66152
    OTU; OTU-like cysteine protease
  3. XM_011476657.3XP_011474959.1  OTU domain-containing protein 3

    See identical proteins and their annotated locations for XP_011474959.1

    UniProtKB/TrEMBL
    A0A3P9KBN7, H2L3L0
    Conserved Domains (1) summary
    cl19932
    Location:66152
    OTU; OTU-like cysteine protease
  4. XM_011476660.3XP_011474962.1  OTU domain-containing protein 3

    See identical proteins and their annotated locations for XP_011474962.1

    UniProtKB/TrEMBL
    A0A3P9KBN7, H2L3L0
    Conserved Domains (1) summary
    cl19932
    Location:66152
    OTU; OTU-like cysteine protease