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zfand4 zinc finger, AN1-type domain 4 [ Oryzias latipes (Japanese medaka) ]

Gene ID: 101158628, updated on 8-Mar-2024

Summary

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Gene symbol
zfand4
Gene description
zinc finger, AN1-type domain 4
See related
EnsemblRapid:ENSORLG00000007496
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias latipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 15
Exon count:
10
Annotation release Status Assembly Chr Location
103 current ASM223467v1 (GCF_002234675.1) 15 NC_019873.2 (22400188..22411149, complement)
102 previous assembly ASM31367v1 (GCF_000313675.1) 15 NC_019873.1 (21686759..21697988, complement)

Chromosome 15 - NC_019873.2Genomic Context describing neighboring genes Neighboring gene arachidonate 5-lipoxygenase a Neighboring gene membrane-associated ring finger (C3HC4) 8 Neighboring gene WASH complex subunit 2C Neighboring gene SMC5-SMC6 complex localization factor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AN1-type zinc finger protein 4
Names
zinc finger AN1-type containing 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM223467v1 Primary Assembly

Genomic

  1. NC_019873.2 Reference ASM223467v1 Primary Assembly

    Range
    22400188..22411149 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004077375.4 → XP_004077423.1  AN1-type zinc finger protein 4

    See identical proteins and their annotated locations for XP_004077423.1

    UniProtKB/TrEMBL
    A0A3P9HK65, H2LTH9
    Related
    ENSORLP00000009398.2, ENSORLT00000009399.3
    Conserved Domains (3) summary
    cd01802
    Location:1 → 103
    AN1_N; ubiquitin-like domain of AN1
    smart00154
    Location:656 → 694
    ZnF_AN1; AN1-like Zinc finger
    smart00213
    Location:28 → 99
    UBQ; Ubiquitin homologues
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials