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PALLD palladin, cytoskeletal associated protein [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 101140478, updated on 6-Jun-2024

Summary

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Gene symbol
PALLD
Gene description
palladin, cytoskeletal associated protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
human mouse all
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Genomic context

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See PALLD in Genome Data Viewer
Location:
chromosome: 3
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 3 NC_073227.2 (189442883..189878334)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 4 NC_073228.1 (182317614..182753060)

Chromosome 3 - NC_073227.2Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U13 Neighboring gene DExD/H-box helicase 60 Neighboring gene DExD/H-box 60 like Neighboring gene small nucleolar RNA SNORA51 Neighboring gene uncharacterized LOC129533302 Neighboring gene U6 spliceosomal RNA Neighboring gene large ribosomal subunit protein uL6-like Neighboring gene uncharacterized LOC129533303 Neighboring gene U6 spliceosomal RNA Neighboring gene carbonyl reductase 4 Neighboring gene uncharacterized LOC129533304 Neighboring gene large ribosomal subunit protein eL6-like Neighboring gene SH3 domain containing ring finger 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables axon guidance receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuronal cell body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
palladin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

  1. NC_073227.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Range
    189442883..189878334
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055385765.2 → XP_055241740.2  palladin isoform X1

    UniProtKB/TrEMBL
    G3S8G0

  2. XM_063705635.1 → XP_063561705.1  palladin isoform X3

    UniProtKB/TrEMBL
    G3S8G0

  3. XM_063705637.1 → XP_063561707.1  palladin isoform X7

    UniProtKB/TrEMBL
    G3S8G0

  4. XM_063705636.1 → XP_063561706.1  palladin isoform X4

    UniProtKB/TrEMBL
    G3R2J9

  5. XM_063705638.1 → XP_063561708.1  palladin isoform X8

    UniProtKB/TrEMBL
    G3R2J9

  6. XM_019025356.4 → XP_018880901.4  palladin isoform X2

  7. XM_055385766.2 → XP_055241741.2  palladin isoform X5

    UniProtKB/TrEMBL
    G3S8G0

  8. XM_055385767.2 → XP_055241742.2  palladin isoform X6

    UniProtKB/TrEMBL
    G3R2J9

  9. XM_031009957.3 → XP_030865817.1  palladin isoform X10

  10. XM_031009958.3 → XP_030865818.1  palladin isoform X11

    UniProtKB/TrEMBL
    A0A2I2YWK4
    Conserved Domains (2) summary
    cd05893
    Location:540 → 614
    Ig_Palladin_C; C-terminal immunoglobulin (Ig)-like domain of palladin
    pfam07679
    Location:424 → 514
    I-set; Immunoglobulin I-set domain

  11. XM_063705639.1 → XP_063561709.1  palladin isoform X9

Nucleotide Protein
Heading Accession and Version

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