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HACL1 2-hydroxyacyl-CoA lyase 1 [ Ovis aries (sheep) ]

Gene ID: 101119009, updated on 6-Jun-2024

Summary

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Gene symbol
HACL1
Gene description
2-hydroxyacyl-CoA lyase 1
See related
EnsemblRapid:ENSOARG00020020063
Gene type
protein coding
RefSeq status
MODEL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 1 NC_056054.1 (273606816..273653993, complement)

Chromosome 1 - NC_056054.1Genomic Context describing neighboring genes Neighboring gene methyltransferase 6, tRNA N3-cytidine Neighboring gene ELL associated factor 1 Neighboring gene collagen like tail subunit of asymmetric acetylcholinesterase Neighboring gene small ribosomal subunit protein eS26-like Neighboring gene biotinidase Neighboring gene ankyrin repeat domain 28

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056054.1 Chromosome 1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables thiamine pyrophosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid alpha-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-hydroxyacyl-CoA lyase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056054.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    273606816..273653993 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015092713.4 → XP_014948199.2  2-hydroxyacyl-CoA lyase 1 isoform X3

    UniProtKB/TrEMBL
    W5Q0R8
    Related
    ENSOARP00020025977.1, ENSOART00020031427.2

  2. XM_060396624.1 → XP_060252607.1  2-hydroxyacyl-CoA lyase 1 isoform X2

    UniProtKB/TrEMBL
    W5Q0R8
    Related
    ENSOARP00020025862.2, ENSOART00020031305.2

  3. XM_004003415.5 → XP_004003464.2  2-hydroxyacyl-CoA lyase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P3E0M9, W5Q0R8
    Related
    ENSOARP00020036488.1, ENSOART00020054489.1
    Conserved Domains (1) summary
    PRK09259
    Location:19 → 566
    PRK09259; putative oxalyl-CoA decarboxylase; Validated

RNA

  1. XR_009595852.1 RNA Sequence

  2. XR_009595851.1 RNA Sequence

  3. XR_009595850.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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