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AGBL5 AGBL carboxypeptidase 5 [ Ovis aries (sheep) ]

Gene ID: 101112799, updated on 6-Jun-2024

Summary

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Gene symbol
AGBL5
Gene description
AGBL carboxypeptidase 5
See related
EnsemblRapid:ENSOARG00020001275
Gene type
protein coding
RefSeq status
MODEL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 3 NC_056056.1 (34133260..34152844)

Chromosome 3 - NC_056056.1Genomic Context describing neighboring genes Neighboring gene microtubule associated protein RP/EB family member 3 Neighboring gene small nucleolar RNA SNORA62/SNORA6 family Neighboring gene transmembrane protein 214 Neighboring gene transfer RNA tyrosine (anticodon GUA) Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene oligosaccharyltransferase complex subunit 4, non-catalytic Neighboring gene elastin microfibril interfacer 1 Neighboring gene uncharacterized LOC114113902 Neighboring gene ketohexokinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056056.1 Chromosome 3 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metallocarboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deglutamylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytosolic carboxypeptidase-like protein 5
Names
ATP/GTP binding protein like 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056056.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    34133260..34152844
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042245894.2 → XP_042101828.1  cytosolic carboxypeptidase-like protein 5 isoform X1

    UniProtKB/TrEMBL
    W5QCN0
    Conserved Domains (2) summary
    cd06236
    Location:183 → 574
    M14_AGBL5_like; Peptidase M14-like domain of ATP/GTP binding protein (AGBL)-5 and related proteins
    pfam18027
    Location:10 → 155
    Pepdidase_M14_N; Cytosolic carboxypeptidase N-terminal domain

  2. XM_042245893.2 → XP_042101827.1  cytosolic carboxypeptidase-like protein 5 isoform X1

    UniProtKB/TrEMBL
    W5QCN0
    Conserved Domains (2) summary
    cd06236
    Location:183 → 574
    M14_AGBL5_like; Peptidase M14-like domain of ATP/GTP binding protein (AGBL)-5 and related proteins
    pfam18027
    Location:10 → 155
    Pepdidase_M14_N; Cytosolic carboxypeptidase N-terminal domain

  3. XM_027966595.3 → XP_027822396.1  cytosolic carboxypeptidase-like protein 5 isoform X1

    UniProtKB/TrEMBL
    W5QCN0
    Conserved Domains (2) summary
    cd06236
    Location:183 → 574
    M14_AGBL5_like; Peptidase M14-like domain of ATP/GTP binding protein (AGBL)-5 and related proteins
    pfam18027
    Location:10 → 155
    Pepdidase_M14_N; Cytosolic carboxypeptidase N-terminal domain

  4. XM_060411960.1 → XP_060267943.1  cytosolic carboxypeptidase-like protein 5 isoform X6

  5. XM_015094263.3 → XP_014949749.2  cytosolic carboxypeptidase-like protein 5 isoform X4

    UniProtKB/TrEMBL
    W5QCN0
    Related
    ENSOARP00020001603.1, ENSOART00020001931.2

  6. XM_027966597.3 → XP_027822398.1  cytosolic carboxypeptidase-like protein 5 isoform X3

    UniProtKB/TrEMBL
    W5QCN0

  7. XM_027966598.2 → XP_027822399.1  cytosolic carboxypeptidase-like protein 5 isoform X5

    UniProtKB/TrEMBL
    W5QCN0
    Related
    ENSOARP00020048142.1, ENSOART00020075582.1

  8. XM_060411959.1 → XP_060267942.1  cytosolic carboxypeptidase-like protein 5 isoform X2

    UniProtKB/TrEMBL
    W5QCN0

  9. XM_027966599.3 → XP_027822400.1  cytosolic carboxypeptidase-like protein 5 isoform X7

  10. XM_042245895.2 → XP_042101829.1  cytosolic carboxypeptidase-like protein 5 isoform X1

    UniProtKB/TrEMBL
    W5QCN0
    Conserved Domains (2) summary
    cd06236
    Location:183 → 574
    M14_AGBL5_like; Peptidase M14-like domain of ATP/GTP binding protein (AGBL)-5 and related proteins
    pfam18027
    Location:10 → 155
    Pepdidase_M14_N; Cytosolic carboxypeptidase N-terminal domain

  11. XM_060411961.1 → XP_060267944.1  cytosolic carboxypeptidase-like protein 5 isoform X6

RNA

  1. XR_006059135.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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