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TGIF1 TGFB induced factor homeobox 1 [ Ovis aries (sheep) ]

Gene ID: 101105544, updated on 8-Mar-2024

Summary

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Gene symbol
TGIF1
Gene description
TGFB induced factor homeobox 1
See related
EnsemblRapid:ENSOARG00020012393
Gene type
protein coding
RefSeq status
MODEL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Orthologs
human mouse all
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Genomic context

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See TGIF1 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 23 NC_056076.1 (38010699..38019077)

Chromosome 23 - NC_056076.1Genomic Context describing neighboring genes Neighboring gene myosin regulatory light chain 12B Neighboring gene uncharacterized LOC132658471 Neighboring gene uncharacterized LOC132658472 Neighboring gene uncharacterized LOC121817766 Neighboring gene uncharacterized LOC132658501 Neighboring gene uncharacterized LOC132658502 Neighboring gene DLG associated protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056076.1 Chromosome 23 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox protein TGIF1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056076.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    38010699..38019077
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042239656.2 → XP_042095590.1  homeobox protein TGIF1 isoform X2

    UniProtKB/TrEMBL
    A0A836CUN6
    Conserved Domains (1) summary
    pfam05920
    Location:33 → 72
    Homeobox_KN; Homeobox KN domain

  2. XM_027960764.3 → XP_027816565.1  homeobox protein TGIF1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7DD01, A0A836CUN6, A2VC00
    Conserved Domains (1) summary
    pfam05920
    Location:53 → 92
    Homeobox_KN; Homeobox KN domain

  3. XM_042239657.2 → XP_042095591.1  homeobox protein TGIF1 isoform X2

    UniProtKB/TrEMBL
    A0A836CUN6
    Related
    ENSOARP00020015673.2, ENSOART00020018931.2
    Conserved Domains (1) summary
    pfam05920
    Location:33 → 72
    Homeobox_KN; Homeobox KN domain
Nucleotide Protein Strain
Heading Accession and Version

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