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STAMBPL1 STAM binding protein like 1 [ Felis catus (domestic cat) ]

Gene ID: 101093298, updated on 17-Aug-2024

Summary

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Official Symbol
STAMBPL1
Official Full Name
STAM binding protein like 1
Primary source
VGNC:VGNC:65748
See related
EnsemblRapid:ENSFCTG00005004412
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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See STAMBPL1 in Genome Data Viewer
Location:
chromosome: D2
Exon count:
13
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) D2 NC_058378.1 (8349750..8399058)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) D2 NC_018733.3 (8523932..8573213)

Chromosome D2 - NC_058378.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene lipase family member M Neighboring gene ankyrin repeat domain 22 Neighboring gene actin alpha 2, smooth muscle Neighboring gene uncharacterized LOC109492968

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K63-linked deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal-dependent deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein K63-linked deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AMSH-like protease

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058378.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    8349750..8399058
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023240337.2 → XP_023096105.1  AMSH-like protease

    UniProtKB/TrEMBL
    A0A2I2V4S8, A0A5F5XHP4
    Related
    ENSFCTP00005007549.1, ENSFCTT00005011893.1
    Conserved Domains (3) summary
    cd08066
    Location:266 → 436
    MPN_AMSH_like; Mov34/MPN/PAD-1 family
    pfam08969
    Location:22 → 129
    USP8_dimer; USP8 dimerisation domain
    cl27006
    Location:109 → 195
    Trigger_N; Bacterial trigger factor protein (TF)

  2. XM_023240336.2 → XP_023096104.1  AMSH-like protease

    UniProtKB/TrEMBL
    A0A2I2V4S8, A0A5F5XHP4
    Conserved Domains (3) summary
    cd08066
    Location:266 → 436
    MPN_AMSH_like; Mov34/MPN/PAD-1 family
    pfam08969
    Location:22 → 129
    USP8_dimer; USP8 dimerisation domain
    cl27006
    Location:109 → 195
    Trigger_N; Bacterial trigger factor protein (TF)

  3. XM_003993870.6 → XP_003993919.1  AMSH-like protease

    UniProtKB/TrEMBL
    A0A2I2V4S8, A0A5F5XHP4
    Related
    ENSFCTP00005007541.1, ENSFCTT00005011885.1
    Conserved Domains (3) summary
    cd08066
    Location:266 → 436
    MPN_AMSH_like; Mov34/MPN/PAD-1 family
    pfam08969
    Location:22 → 129
    USP8_dimer; USP8 dimerisation domain
    cl27006
    Location:109 → 195
    Trigger_N; Bacterial trigger factor protein (TF)
Nucleotide Protein
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