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STX16 syntaxin 16 [ Felis catus (domestic cat) ]

Gene ID: 101088739, updated on 17-Aug-2024

Summary

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Official Symbol
STX16
Official Full Name
syntaxin 16
Primary source
VGNC:VGNC:110159
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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See STX16 in Genome Data Viewer
Location:
chromosome: A3
Exon count:
12
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) A3 NC_058370.1 (4645913..4672396, complement)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) A3 NC_018725.3 (4827293..4854245, complement)

Chromosome A3 - NC_058370.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123384251 Neighboring gene uncharacterized LOC123384252 Neighboring gene aminopeptidase like 1 Neighboring gene APC down-regulated 1 like Neighboring gene VAMP associated protein B and C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNAP receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle docking IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SNARE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syntaxin-16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058370.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    4645913..4672396 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019826299.3 → XP_019681858.1  syntaxin-16 isoform X1

    UniProtKB/TrEMBL
    A0A5F5XEV7
    Conserved Domains (2) summary
    cd15845
    Location:246 → 304
    SNARE_syntaxin16; SNARE motif of syntaxin 16
    cl26014
    Location:85 → 314
    SynN; Syntaxin N-terminus domain; syntaxins are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane; they are a family of receptors for intracellular transport vesicles; each target membrane may ...

  2. XM_019826301.3 → XP_019681860.1  syntaxin-16 isoform X4

    UniProtKB/TrEMBL
    A0A5F5XEV7
    Conserved Domains (2) summary
    cd15845
    Location:229 → 287
    SNARE_syntaxin16; SNARE motif of syntaxin 16
    cl26014
    Location:68 → 297
    SynN; Syntaxin N-terminus domain; syntaxins are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane; they are a family of receptors for intracellular transport vesicles; each target membrane may ...

  3. XM_011280767.4 → XP_011279069.1  syntaxin-16 isoform X3

    UniProtKB/TrEMBL
    A0A2I2UJA1, A0A5F5XEV7
    Conserved Domains (3) summary
    cd15845
    Location:230 → 288
    SNARE_syntaxin16; SNARE motif of syntaxin 16
    pfam00804
    Location:78 → 262
    Syntaxin; Syntaxin
    cl00143
    Location:76 → 191
    SynN; Syntaxin N-terminus domain; syntaxins are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane; they are a family of receptors for intracellular transport vesicles; each target membrane may ...

  4. XM_023251065.2 → XP_023106833.1  syntaxin-16 isoform X2

    UniProtKB/TrEMBL
    A0A337SI94, A0A5F5XEV7
    Conserved Domains (2) summary
    cd15845
    Location:234 → 292
    SNARE_syntaxin16; SNARE motif of syntaxin 16
    cl26014
    Location:73 → 302
    SynN; Syntaxin N-terminus domain; syntaxins are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane; they are a family of receptors for intracellular transport vesicles; each target membrane may ...

  5. XM_023251066.2 → XP_023106834.1  syntaxin-16 isoform X6

    UniProtKB/TrEMBL
    A0A5F5XEV7
    Conserved Domains (2) summary
    cd15845
    Location:217 → 275
    SNARE_syntaxin16; SNARE motif of syntaxin 16
    cl26014
    Location:56 → 285
    SynN; Syntaxin N-terminus domain; syntaxins are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane; they are a family of receptors for intracellular transport vesicles; each target membrane may ...

  6. XM_011280769.4 → XP_011279071.1  syntaxin-16 isoform X7

    UniProtKB/TrEMBL
    A0A5F5XEV7
    Conserved Domains (3) summary
    cd15845
    Location:213 → 271
    SNARE_syntaxin16; SNARE motif of syntaxin 16
    pfam00804
    Location:61 → 245
    Syntaxin; Syntaxin
    cl00143
    Location:59 → 174
    SynN; Syntaxin N-terminus domain; syntaxins are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane; they are a family of receptors for intracellular transport vesicles; each target membrane may ...

  7. XM_011280773.4 → XP_011279075.1  syntaxin-16 isoform X8

    See identical proteins and their annotated locations for XP_011279075.1

    UniProtKB/TrEMBL
    A0A5F5XEV7
    Conserved Domains (2) summary
    COG5325
    Location:28 → 257
    COG5325; t-SNARE complex subunit, syntaxin [Intracellular trafficking and secretion]
    cd15845
    Location:189 → 247
    SNARE_syntaxin16; SNARE motif of syntaxin 16

  8. XM_023251067.2 → XP_023106835.1  syntaxin-16 isoform X8

    UniProtKB/TrEMBL
    A0A5F5XEV7
    Conserved Domains (2) summary
    COG5325
    Location:28 → 257
    COG5325; t-SNARE complex subunit, syntaxin [Intracellular trafficking and secretion]
    cd15845
    Location:189 → 247
    SNARE_syntaxin16; SNARE motif of syntaxin 16

  9. XM_023251068.2 → XP_023106836.1  syntaxin-16 isoform X8

    UniProtKB/TrEMBL
    A0A5F5XEV7
    Conserved Domains (2) summary
    COG5325
    Location:28 → 257
    COG5325; t-SNARE complex subunit, syntaxin [Intracellular trafficking and secretion]
    cd15845
    Location:189 → 247
    SNARE_syntaxin16; SNARE motif of syntaxin 16

  10. XM_045053443.1 → XP_044909378.1  syntaxin-16 isoform X8

    UniProtKB/TrEMBL
    A0A5F5XEV7
    Conserved Domains (2) summary
    COG5325
    Location:28 → 257
    COG5325; t-SNARE complex subunit, syntaxin [Intracellular trafficking and secretion]
    cd15845
    Location:189 → 247
    SNARE_syntaxin16; SNARE motif of syntaxin 16

  11. XM_019826302.3 → XP_019681861.1  syntaxin-16 isoform X5

    UniProtKB/TrEMBL
    A0A5F5XEV7
    Conserved Domains (2) summary
    cd15845
    Location:246 → 304
    SNARE_syntaxin16; SNARE motif of syntaxin 16
    cl26014
    Location:85 → 304
    SynN; Syntaxin N-terminus domain; syntaxins are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane; they are a family of receptors for intracellular transport vesicles; each target membrane may ...
Nucleotide Protein
Heading Accession and Version

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