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ZNHIT1 zinc finger HIT-type containing 1 [ Felis catus (domestic cat) ]

Gene ID: 101081432, updated on 17-Aug-2024

Summary

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Official Symbol
ZNHIT1
Official Full Name
zinc finger HIT-type containing 1
Primary source
VGNC:VGNC:67366
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: E3
Exon count:
10
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) E3 NC_058383.1 (8112370..8128114)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) E3 NC_018738.3 (8177191..8183340)

Chromosome E3 - NC_058383.1Genomic Context describing neighboring genes Neighboring gene monoacylglycerol O-acyltransferase 3 Neighboring gene uncharacterized LOC111558218 Neighboring gene procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 Neighboring gene claudin 15 Neighboring gene fission, mitochondrial 1 Neighboring gene transmembrane 9 superfamily member 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing and comparative genomic analysis of 1227 Felis catus cDNA sequences enriched for developmental, clinical and nutritional phenotypes. Irizarry KJ, et al. BMC Genomics, 2012 Jan 18. PMID 22257742, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Swr1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger HIT domain-containing protein 1; zinc finger HIT-type containing 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058383.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    8112370..8128114
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006942009.4 → XP_006942071.1  zinc finger HIT domain-containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_006942071.1

    Conserved Domains (2) summary
    pfam04438
    Location:125 → 152
    zf-HIT; HIT zinc finger
    cl02154
    Location:87 → 147
    YL1_C; YL1 nuclear protein C-terminal domain

  2. XM_003998528.4 → XP_003998577.1  zinc finger HIT domain-containing protein 1 isoform X2

    See identical proteins and their annotated locations for XP_003998577.1

    UniProtKB/TrEMBL
    A0A2I2UZ80
    Conserved Domains (2) summary
    pfam04438
    Location:113 → 140
    zf-HIT; HIT zinc finger
    cl02154
    Location:75 → 135
    YL1_C; YL1 nuclear protein C-terminal domain

RNA

  1. XR_006590872.1 RNA Sequence

  2. XR_006590873.1 RNA Sequence

  3. XR_006590874.1 RNA Sequence

  4. XR_006590875.1 RNA Sequence

  5. XR_006590877.1 RNA Sequence

  6. XR_006590878.1 RNA Sequence

  7. XR_006590879.1 RNA Sequence

  8. XR_006590880.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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