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frk fyn-related Src family tyrosine kinase [ Takifugu rubripes (torafugu) ]

Gene ID: 101079027, updated on 11-Apr-2024

Summary

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Gene symbol
frk
Gene description
fyn-related Src family tyrosine kinase
See related
Ensembl:ENSTRUG00000006360
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 16
Exon count:
8
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 16 NC_042300.1 (791586..801047, complement)
101 previous assembly FUGU5 (GCF_000180615.1) Unplaced Scaffold NW_004072368.1 (554886..564151)

Chromosome 16 - NC_042300.1Genomic Context describing neighboring genes Neighboring gene heparan sulfate-glucosamine 3-sulfotransferase 5 Neighboring gene uncharacterized LOC105418630 Neighboring gene 5'-nucleotidase domain containing 1 Neighboring gene collagen, type X, alpha 1b Neighboring gene uncharacterized LOC115252903

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables non-membrane spanning protein tyrosine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extrinsic component of cytoplasmic side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tyrosine-protein kinase FRK

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042300.1 Reference fTakRub1.2 Primary Assembly

    Range
    791586..801047 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003977323.3 → XP_003977372.1  tyrosine-protein kinase FRK

    UniProtKB/TrEMBL
    H2SSY6
    Related
    ENSTRUP00000015523.2, ENSTRUT00000015592.3
    Conserved Domains (3) summary
    cd11845
    Location:61 → 115
    SH3_Src_like; Src homology 3 domain of Src kinase-like Protein Tyrosine Kinases
    cd05068
    Location:236 → 505
    PTKc_Frk_like; Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases
    cl15255
    Location:123 → 218
    SH2; Src homology 2 (SH2) domain
Nucleotide Protein
Heading Accession and Version

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