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foxo4 forkhead box O4 [ Takifugu rubripes (torafugu) ]

Gene ID: 101073232, updated on 8-Mar-2024

Summary

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Gene symbol
foxo4
Gene description
forkhead box O4
See related
Ensembl:ENSTRUG00000012453
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 14
Exon count:
3
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 14 NC_042298.1 (3697697..3703982)
101 previous assembly FUGU5 (GCF_000180615.1) 14 NC_018903.1 (1795714..1801973)

Chromosome 14 - NC_042298.1Genomic Context describing neighboring genes Neighboring gene serine protease 23 Neighboring gene ubiquitin-like 3b Neighboring gene sestrin 4 Neighboring gene ALG13 UDP-N-acetylglucosaminyltransferase subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
forkhead box protein O4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042298.1 Reference fTakRub1.2 Primary Assembly

    Range
    3697697..3703982
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029847819.1 → XP_029703679.1  forkhead box protein O4

    UniProtKB/TrEMBL
    H2U3N4
    Related
    ENSTRUP00000031545.3, ENSTRUT00000031668.3
    Conserved Domains (3) summary
    cd00059
    Location:97 → 177
    FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
    pfam16675
    Location:421 → 462
    FOXO_KIX_bdg; KIX-binding domain of forkhead box O, CR2
    pfam16676
    Location:586 → 625
    FOXO-TAD; Transactivation domain of FOXO protein family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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