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crebzf CREB/ATF bZIP transcription factor [ Takifugu rubripes (torafugu) ]

Gene ID: 101061081, updated on 8-Mar-2024

Summary

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Gene symbol
crebzf
Gene description
CREB/ATF bZIP transcription factor
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 20
Exon count:
4
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 20 NC_042304.1 (18011741..18013869)
101 previous assembly FUGU5 (GCF_000180615.1) Unplaced Scaffold NW_004071795.1 (12398..14751, complement)

Chromosome 20 - NC_042304.1Genomic Context describing neighboring genes Neighboring gene HAUS augmin-like complex, subunit 7 Neighboring gene LAS1 like ribosome biogenesis factor Neighboring gene uncharacterized LOC115247226 Neighboring gene rho guanine nucleotide exchange factor 10-like protein Neighboring gene natriuretic peptide A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CREB/ATF bZIP transcription factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042304.1 Reference fTakRub1.2 Primary Assembly

    Range
    18011741..18013869
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003976913.3 → XP_003976962.3  CREB/ATF bZIP transcription factor

    UniProtKB/TrEMBL
    A0A3B5K6Z0
    Conserved Domains (1) summary
    cd14706
    Location:110 → 160
    bZIP_CREBZF; Basic leucine zipper (bZIP) domain of CREBZF/Zhangfei transcription factor and similar proteins: a DNA-binding and dimerization domain

RNA

  1. XR_003886287.1 RNA Sequence

  2. XR_965667.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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