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SYS1 SYS1 golgi trafficking protein [ Saimiri boliviensis (Bolivian squirrel monkey) ]

Gene ID: 101052706, updated on 8-Mar-2024

Summary

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Gene symbol
SYS1
Gene description
SYS1 golgi trafficking protein
See related
EnsemblRapid:ENSSBOG00000048161
Gene type
protein coding
RefSeq status
MODEL
Organism
Saimiri boliviensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100935.1 (37586957..37600194)

NW_024100935.1Genomic Context describing neighboring genes Neighboring gene matrilin 4 Neighboring gene recombination signal binding protein for immunoglobulin kappa J region like Neighboring gene syndecan 4 Neighboring gene TP53 target 5 Neighboring gene dysbindin domain containing 2 Neighboring gene phosphatidylinositol glycan anchor biosynthesis class T

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024100935 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi to endosome transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in Golgi to plasma membrane protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein SYS1 homolog
Names
SYS1 Golgi-localized integral membrane protein homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Sbol_2.0 Primary Assembly

Genomic

  1. NW_024100935.1 Reference BCM_Sbol_2.0 Primary Assembly

    Range
    37586957..37600194
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003936440.3 → XP_003936489.1  protein SYS1 homolog isoform X2

    UniProtKB/TrEMBL
    A0A2K6U4J5
    Related
    ENSSBOP00000045816.1, ENSSBOT00000073908.1
    Conserved Domains (1) summary
    pfam09801
    Location:5 → 76
    SYS1; Integral membrane protein S linking to the trans Golgi network

  2. XM_003936435.3 → XP_003936484.1  protein SYS1 homolog isoform X1

    See identical proteins and their annotated locations for XP_003936484.1

    UniProtKB/TrEMBL
    A0A2K6U4F8
    Conserved Domains (1) summary
    pfam09801
    Location:5 → 148
    SYS1; Integral membrane protein S linking to the trans Golgi network

  3. XM_003936436.3 → XP_003936485.1  protein SYS1 homolog isoform X1

    See identical proteins and their annotated locations for XP_003936485.1

    UniProtKB/TrEMBL
    A0A2K6U4F8
    Conserved Domains (1) summary
    pfam09801
    Location:5 → 148
    SYS1; Integral membrane protein S linking to the trans Golgi network
Nucleotide Protein
Heading Accession and Version

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