U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MSH6 mutS homolog 6 [ Saimiri boliviensis (Bolivian squirrel monkey) ]

Gene ID: 101039649, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
MSH6
Gene description
mutS homolog 6
See related
EnsemblRapid:ENSSBOG00000011609
Gene type
protein coding
RefSeq status
MODEL
Organism
Saimiri boliviensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See MSH6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100918.1 (57973408..58004566)

NW_024100918.1Genomic Context describing neighboring genes Neighboring gene ribosomal biogenesis factor-like Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like Neighboring gene F-box protein 11 Neighboring gene U6 spliceosomal RNA Neighboring gene ubiquitin-40S ribosomal protein S27a-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_024100918 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent DNA damage sensor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mismatched DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mismatch repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of MutSalpha complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
DNA mismatch repair protein Msh6

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Sbol_2.0 Primary Assembly

Genomic

  1. NW_024100918.1 Reference BCM_Sbol_2.0 Primary Assembly

    Range
    57973408..58004566
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003922758.3 → XP_003922807.2  DNA mismatch repair protein Msh6

    UniProtKB/TrEMBL
    A0A2K6S4G8
    Related
    ENSSBOP00000002276.2, ENSSBOT00000013102.2
    Conserved Domains (2) summary
    cd05837
    Location:87 → 194
    MSH6_like; The PWWP domain is present in MSH6, a mismatch repair protein homologous to bacterial MutS. The PWWP domain of histone-lysine N-methyltransferase, also known as Nuclear SET domain-containing protein 3, is also included. Mutations in MSH6 have been ...
    COG0249
    Location:406 → 1334
    MutS; DNA mismatch repair ATPase MutS [Replication, recombination and repair]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.