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PTBP1 polypyrimidine tract binding protein 1 [ Saimiri boliviensis (Bolivian squirrel monkey) ]

Gene ID: 101029560, updated on 8-Mar-2024

Summary

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Gene symbol
PTBP1
Gene description
polypyrimidine tract binding protein 1
See related
EnsemblRapid:ENSSBOG00000034376
Gene type
protein coding
RefSeq status
MODEL
Organism
Saimiri boliviensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100963.1 (10675904..10689646)

NW_024100963.1Genomic Context describing neighboring genes Neighboring gene paralemmin Neighboring gene mitotic spindle positioning Neighboring gene phospholipid phosphatase related 3 Neighboring gene azurocidin 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024100963 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of RNA splicing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypyrimidine tract-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Sbol_2.0 Primary Assembly

Genomic

  1. NW_024100963.1 Reference BCM_Sbol_2.0 Primary Assembly

    Range
    10675904..10689646
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039466027.1 → XP_039321961.1  polypyrimidine tract-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A2K6UX89
    Related
    ENSSBOP00000036526.2, ENSSBOT00000053459.2
    Conserved Domains (1) summary
    TIGR01649
    Location:57 → 557
    hnRNP-L_PTB; hnRNP-L/PTB/hephaestus splicing factor family

  2. XM_039466028.1 → XP_039321962.1  polypyrimidine tract-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A2K6UX89
    Related
    ENSSBOP00000036532.2, ENSSBOT00000053465.2
    Conserved Domains (1) summary
    TIGR01649
    Location:57 → 531
    hnRNP-L_PTB; hnRNP-L/PTB/hephaestus splicing factor family
Nucleotide Protein
Heading Accession and Version

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