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PDZD8 PDZ domain containing 8 [ Papio anubis (olive baboon) ]

Gene ID: 101015497, updated on 11-Apr-2024

Summary

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Gene symbol
PDZD8
Gene description
PDZ domain containing 8
See related
Ensembl:ENSPANG00000020702
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
5
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 11 NC_044986.1 (15866063..15972972)
103 previous assembly Panu_3.0 (GCF_000264685.3) 9 NC_018160.2 (109403290..109506687, complement)

Chromosome 11 - NC_044986.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108580527 Neighboring gene uncharacterized LOC103887758 Neighboring gene uncharacterized LOC116269413 Neighboring gene solute carrier family 18 member A2 Neighboring gene potassium two pore domain channel subfamily K member 18

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial calcium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrion-endoplasmic reticulum membrane tethering IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondria-associated endoplasmic reticulum membrane contact site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PDZ domain-containing protein 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044986.1 Reference Panubis1.0 Primary Assembly

    Range
    15866063..15972972
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003904308.5 → XP_003904357.1  PDZ domain-containing protein 8 isoform X1

    UniProtKB/TrEMBL
    A0A8I5NNG5
    Related
    ENSPANP00000057850.1, ENSPANT00000062619.1
    Conserved Domains (3) summary
    cd00029
    Location:841 → 883
    C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
    cd00992
    Location:364 → 441
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam15720
    Location:516 → 603
    DUF4675; Domain of unknown function (DUF4675)

  2. XM_021943730.2 → XP_021799422.1  PDZ domain-containing protein 8 isoform X2

    UniProtKB/TrEMBL
    A0A096NTV9, A0A8I5NNG5
    Related
    ENSPANP00000016480.3, ENSPANT00000006073.3
    Conserved Domains (3) summary
    cd00029
    Location:800 → 842
    C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
    cd00992
    Location:323 → 400
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cl26464
    Location:476 → 572
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
Heading Accession and Version

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