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XPR1 xenotropic and polytropic retrovirus receptor 1 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100970013, updated on 11-Apr-2024

Summary

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Gene symbol
XPR1
Gene description
xenotropic and polytropic retrovirus receptor 1
See related
Ensembl:ENSPPAG00000023632
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See XPR1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 1 NC_073249.2 (68880965..69127527, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 1 NC_073249.1 (68539233..68785782, complement)

Chromosome 1 - NC_073249.2Genomic Context describing neighboring genes Neighboring gene major histocompatibility complex class I-related gene protein-like Neighboring gene KIAA1614 ortholog Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC134728765 Neighboring gene acyl-CoA binding domain containing 6 Neighboring gene voltage-dependent anion-selective channel protein 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables inositol hexakisphosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to phosphate starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphate ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier family 53 member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073249.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    68880965..69127527 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003824723.4 → XP_003824771.1  solute carrier family 53 member 1 isoform X1

    See identical proteins and their annotated locations for XP_003824771.1

    UniProtKB/TrEMBL
    A0A2R8ZLI4
    Related
    ENSPPAP00000005813.1
    Conserved Domains (2) summary
    cd14477
    Location:2 → 165
    SPX_XPR1_like; SPX domain of the xenotropic and polytropic retrovirus receptor 1 (XPR1) and related proteins
    pfam03124
    Location:268 → 617
    EXS; EXS family

  2. XM_034941805.3 → XP_034797696.1  solute carrier family 53 member 1 isoform X2

    UniProtKB/TrEMBL
    A0A2R8ZLJ0
    Conserved Domains (2) summary
    cd14477
    Location:2 → 165
    SPX_XPR1_like; SPX domain of the xenotropic and polytropic retrovirus receptor 1 (XPR1) and related proteins
    pfam03124
    Location:268 → 552
    EXS; EXS family
Nucleotide Protein
Heading Accession and Version

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