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UBR3 ubiquitin protein ligase E3 component n-recognin 3 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100969328, updated on 6-Jun-2024

Summary

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Gene symbol
UBR3
Gene description
ubiquitin protein ligase E3 component n-recognin 3
See related
Ensembl:ENSPPAG00000027016
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
39
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 13 NC_073262.2 (72488392..72756599)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 2B NC_073251.1 (72503370..72770358)

Chromosome 13 - NC_073262.2Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U3 Neighboring gene methyltransferase 5, N6-adenosine Neighboring gene small RNA binding exonuclease protection factor La Neighboring gene ribosome biogenesis protein NSA2 homolog Neighboring gene U6 spliceosomal RNA Neighboring gene myosin IIIB Neighboring gene high mobility group protein B1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process via the N-end rule pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase UBR3
Names
ubiquitin protein ligase E3 component n-recognin 3 (putative)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073262.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    72488392..72756599
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034954464.3 → XP_034810355.2  E3 ubiquitin-protein ligase UBR3 isoform X1

    UniProtKB/TrEMBL
    A0A2R8ZXS5

  2. XM_034954467.3 → XP_034810358.2  E3 ubiquitin-protein ligase UBR3 isoform X2

    UniProtKB/TrEMBL
    A0A2R8ZXS5

  3. XM_034954465.3 → XP_034810356.2  E3 ubiquitin-protein ligase UBR3 isoform X3

    UniProtKB/TrEMBL
    A0A2R8ZRZ2
Nucleotide Protein
Heading Accession and Version

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