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CLEC7A C-type lectin domain containing 7A [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100962455, updated on 8-Mar-2024

Summary

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Gene symbol
CLEC7A
Gene description
C-type lectin domain containing 7A
See related
Ensembl:ENSOGAG00000000854
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852694.1 (356755..372896)

NW_003852694.1Genomic Context describing neighboring genes Neighboring gene oxidized low density lipoprotein receptor 1 Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC111722639 Neighboring gene U6 spliceosomal RNA Neighboring gene C-type lectin domain family 1 member A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852694 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables (1->3)-beta-D-glucan binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pattern recognition receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to molecule of fungal origin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in detection of fungus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in detection of molecule of fungal origin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phagocytosis, recognition IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cell population proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cytokine production involved in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of killing of cells of another organism IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of lymphocyte activation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of wound healing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-type lectin domain family 7 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852694.1 Reference OtoGar3

    Range
    356755..372896
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003803368.3 → XP_003803416.1  C-type lectin domain family 7 member A isoform X1

    UniProtKB/TrEMBL
    H0WHC1
    Related
    ENSOGAP00000000760.2, ENSOGAT00000000854.2
    Conserved Domains (2) summary
    cd03593
    Location:121 → 244
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
    pfam08391
    Location:40 → 85
    Ly49; Ly49-like protein, N-terminal region

  2. XM_012813763.2 → XP_012669217.1  C-type lectin domain family 7 member A isoform X2

    Conserved Domains (1) summary
    cd03593
    Location:44 → 167
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  3. XM_012813762.2 → XP_012669216.1  C-type lectin domain family 7 member A isoform X4

    Conserved Domains (2) summary
    pfam08391
    Location:40 → 85
    Ly49; Ly49-like protein, N-terminal region
    cl02432
    Location:121 → 165
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

  4. XM_023508963.1 → XP_023364731.1  C-type lectin domain family 7 member A isoform X3

    Conserved Domains (1) summary
    pfam08391
    Location:40 → 67
    Ly49; Ly49-like protein, N-terminal region
Nucleotide Protein
Heading Accession and Version

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