U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TRIM8 tripartite motif containing 8 [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100960669, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
TRIM8
Gene description
tripartite motif containing 8
See related
Ensembl:ENSOGAG00000003628
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852416.1 (17941823..17963960, complement)

NW_003852416.1Genomic Context describing neighboring genes Neighboring gene sideroflexin 2 Neighboring gene ADP ribosylation factor like GTPase 3 Neighboring gene SUFU negative regulator of hedgehog signaling Neighboring gene GTPase IMAP family member 4 pseudogene Neighboring gene actin related protein 1A

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_003852416 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
probable E3 ubiquitin-protein ligase TRIM8

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852416.1 Reference OtoGar3

    Range
    17941823..17963960 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003787215.3 → XP_003787263.1  probable E3 ubiquitin-protein ligase TRIM8

    UniProtKB/TrEMBL
    H0WN59
    Related
    ENSOGAP00000003231.2, ENSOGAT00000003632.2
    Conserved Domains (3) summary
    pfam00643
    Location:140 → 182
    zf-B_box; B-box zinc finger
    cl17238
    Location:15 → 55
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
    cl23765
    Location:189 → 257
    iSH2_PI3K_IA_R; Inter-Src homology 2 (iSH2) helical domain of Class IA Phosphoinositide 3-kinase Regulatory subunits
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.