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STAU1 staufen double-stranded RNA binding protein 1 [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100948813, updated on 8-Mar-2024

Summary

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Gene symbol
STAU1
Gene description
staufen double-stranded RNA binding protein 1
See related
Ensembl:ENSOGAG00000002127
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852418.1 (10657611..10724234, complement)

NW_003852418.1Genomic Context describing neighboring genes Neighboring gene ADP ribosylation factor guanine nucleotide exchange factor 2 Neighboring gene chromosome segregation 1 like Neighboring gene DEAD-box helicase 27 Neighboring gene zinc finger NFX1-type containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852418 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
double-stranded RNA-binding protein Staufen homolog 1
Names
staufen, RNA binding protein, homolog 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852418.1 Reference OtoGar3

    Range
    10657611..10724234 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012803881.2 → XP_012659335.1  double-stranded RNA-binding protein Staufen homolog 1 isoform X5

    See identical proteins and their annotated locations for XP_012659335.1

    UniProtKB/TrEMBL
    H0WK35
    Related
    ENSOGAP00000001904.2, ENSOGAT00000002131.2
    Conserved Domains (3) summary
    smart00358
    Location:105 → 169
    DSRM; Double-stranded RNA binding motif
    cd00048
    Location:205 → 271
    DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...
    pfam16482
    Location:367 → 476
    Staufen_C; Staufen C-terminal domain

  2. XM_012803879.2 → XP_012659333.1  double-stranded RNA-binding protein Staufen homolog 1 isoform X4

    See identical proteins and their annotated locations for XP_012659333.1

    UniProtKB/TrEMBL
    H0WK35
    Conserved Domains (3) summary
    smart00358
    Location:105 → 175
    DSRM; Double-stranded RNA binding motif
    cd00048
    Location:211 → 277
    DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...
    pfam16482
    Location:373 → 482
    Staufen_C; Staufen C-terminal domain

  3. XM_012803874.2 → XP_012659328.1  double-stranded RNA-binding protein Staufen homolog 1 isoform X3

    See identical proteins and their annotated locations for XP_012659328.1

    UniProtKB/TrEMBL
    H0WK35
    Conserved Domains (3) summary
    smart00358
    Location:125 → 195
    DSRM; Double-stranded RNA binding motif
    cd00048
    Location:231 → 297
    DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...
    pfam16482
    Location:393 → 502
    Staufen_C; Staufen C-terminal domain

  4. XM_023511936.1 → XP_023367704.1  double-stranded RNA-binding protein Staufen homolog 1 isoform X1

    UniProtKB/TrEMBL
    H0WK35
    Conserved Domains (3) summary
    smart00358
    Location:161 → 231
    DSRM; Double-stranded RNA binding motif
    cd00048
    Location:267 → 333
    DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...
    pfam16482
    Location:429 → 538
    Staufen_C; Staufen C-terminal domain

  5. XM_023511937.1 → XP_023367705.1  double-stranded RNA-binding protein Staufen homolog 1 isoform X2

    UniProtKB/TrEMBL
    H0WK35
    Conserved Domains (3) summary
    smart00358
    Location:161 → 225
    DSRM; Double-stranded RNA binding motif
    cd00048
    Location:261 → 327
    DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...
    pfam16482
    Location:423 → 532
    Staufen_C; Staufen C-terminal domain
Nucleotide Protein
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