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DCLRE1A DNA cross-link repair 1A [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100941551, updated on 8-Mar-2024

Summary

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Gene symbol
DCLRE1A
Gene description
DNA cross-link repair 1A
See related
Ensembl:ENSOGAG00000008924
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852416.1 (7910571..7930336)

NW_003852416.1Genomic Context describing neighboring genes Neighboring gene adrenoceptor beta 1 Neighboring gene NHL repeat containing 2 Neighboring gene NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial pseudogene Neighboring gene pleckstrin homology domain containing S1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852416 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5'-3' DNA exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via nonhomologous end joining IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in interstrand cross-link repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protection from non-homologous end joining at telomere IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA cross-link repair 1A protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852416.1 Reference OtoGar3

    Range
    7910571..7930336
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023511794.1 → XP_023367562.1  DNA cross-link repair 1A protein

    UniProtKB/TrEMBL
    H0WZI3
    Conserved Domains (2) summary
    cd16298
    Location:691 → 846
    SNM1A-like_MBL-fold; 5'-exonucleases human SNM1A and related proteins; MBL-fold metallo-hydrolase domain
    pfam07522
    Location:916 → 1021
    DRMBL; DNA repair metallo-beta-lactamase

  2. XM_023511795.1 → XP_023367563.1  DNA cross-link repair 1A protein

    UniProtKB/TrEMBL
    H0WZI3
    Conserved Domains (2) summary
    cd16298
    Location:691 → 846
    SNM1A-like_MBL-fold; 5'-exonucleases human SNM1A and related proteins; MBL-fold metallo-hydrolase domain
    pfam07522
    Location:916 → 1021
    DRMBL; DNA repair metallo-beta-lactamase

  3. XM_003787153.3 → XP_003787201.1  DNA cross-link repair 1A protein

    UniProtKB/TrEMBL
    H0WZI3
    Related
    ENSOGAP00000008002.2, ENSOGAT00000008929.2
    Conserved Domains (2) summary
    cd16298
    Location:691 → 846
    SNM1A-like_MBL-fold; 5'-exonucleases human SNM1A and related proteins; MBL-fold metallo-hydrolase domain
    pfam07522
    Location:916 → 1021
    DRMBL; DNA repair metallo-beta-lactamase
Nucleotide Protein
Heading Accession and Version

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