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SEC24B SEC24 homolog B, COPII coat complex component [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100931077, updated on 8-Mar-2024

Summary

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Gene symbol
SEC24B
Gene description
SEC24 homolog B, COPII coat complex component
See related
Ensembl:ENSSHAG00000006487
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
24
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 6 NC_045431.1 (128811322..128903708, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 6 Unlocalized Scaffold NW_003846764.1 (234205..318028, complement)

Chromosome 6 - NC_045431.1Genomic Context describing neighboring genes Neighboring gene caspase-6 Neighboring gene uncharacterized LOC105750861 Neighboring gene mitochondrial calcium uniporter dominant negative subunit beta Neighboring gene collagen type XXV alpha 1 chain Neighboring gene oligosaccharyltransferase complex non-catalytic subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in COPII-coated vesicle cargo loading IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of COPII vesicle coat IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum exit site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein transport protein Sec24B
Names
SEC24 family, member B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045431.1 Reference mSarHar1.11 Primary Assembly

    Range
    128811322..128903708 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031942667.1 → XP_031798527.1  protein transport protein Sec24B isoform X2

    UniProtKB/TrEMBL
    A0A7N4Q1Z6, G3VWB0
    Related
    ENSSHAP00000045759.1, ENSSHAT00000049321.1
    Conserved Domains (1) summary
    COG5028
    Location:492 → 1197
    COG5028; Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]

  2. XM_031942666.1 → XP_031798526.1  protein transport protein Sec24B isoform X1

    UniProtKB/TrEMBL
    A0A7N4P8U3, G3VWA9
    Related
    ENSSHAP00000007464.2, ENSSHAT00000007526.2
    Conserved Domains (1) summary
    COG5028
    Location:527 → 1232
    COG5028; Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]
Nucleotide Protein
Heading Accession and Version

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