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ATP9B ATPase phospholipid transporting 9B (putative) [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100926891, updated on 8-Mar-2024

Summary

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Gene symbol
ATP9B
Gene description
ATPase phospholipid transporting 9B (putative)
See related
Ensembl:ENSSHAG00000000789
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
35
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 1 NC_045426.1 (532357023..532808974)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 2 Unlocalized Scaffold NW_003823349.1 (3663..411229)

Chromosome 1 - NC_045426.1Genomic Context describing neighboring genes Neighboring gene galanin receptor 1 Neighboring gene spalt like transcription factor 3 Neighboring gene 60S ribosomal protein L34 pseudogene Neighboring gene DNA topoisomerase 1-like Neighboring gene eukaryotic translation initiation factor 1 pseudogene Neighboring gene nuclear factor of activated T cells 1 Neighboring gene CTD phosphatase subunit 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATPase-coupled intramembrane lipid transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable phospholipid-transporting ATPase IIB

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045426.1 Reference mSarHar1.11 Primary Assembly

    Range
    532357023..532808974
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031946730.1 → XP_031802590.1  probable phospholipid-transporting ATPase IIB isoform X1

    UniProtKB/TrEMBL
    G3VCH8
    Related
    ENSSHAP00000037669.1, ENSSHAT00000043542.1
    Conserved Domains (2) summary
    cd07541
    Location:134 → 1058
    P-type_ATPase_APLT_Neo1-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Neo1p and human putative APLT, ATP9B
    pfam13246
    Location:551 → 662
    Cation_ATPase; Cation transport ATPase (P-type)

  2. XM_031946732.1 → XP_031802592.1  probable phospholipid-transporting ATPase IIB isoform X3

    UniProtKB/TrEMBL
    A0A7N4P7I7
    Conserved Domains (2) summary
    cd07541
    Location:134 → 1042
    P-type_ATPase_APLT_Neo1-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Neo1p and human putative APLT, ATP9B
    pfam13246
    Location:551 → 662
    Cation_ATPase; Cation transport ATPase (P-type)

  3. XM_031946731.1 → XP_031802591.1  probable phospholipid-transporting ATPase IIB isoform X2

    UniProtKB/TrEMBL
    G3VCH8
    Related
    ENSSHAP00000000882.2, ENSSHAT00000000893.2
    Conserved Domains (2) summary
    cd07541
    Location:134 → 1058
    P-type_ATPase_APLT_Neo1-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Neo1p and human putative APLT, ATP9B
    pfam13246
    Location:551 → 662
    Cation_ATPase; Cation transport ATPase (P-type)

  4. XM_031946733.1 → XP_031802593.1  probable phospholipid-transporting ATPase IIB isoform X4

    UniProtKB/TrEMBL
    A0A7N4PFF6
    Conserved Domains (2) summary
    cd07541
    Location:1 → 863
    P-type_ATPase_APLT_Neo1-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Neo1p and human putative APLT, ATP9B
    pfam13246
    Location:356 → 467
    Cation_ATPase; Cation transport ATPase (P-type)

  5. XM_031946736.1 → XP_031802596.1  probable phospholipid-transporting ATPase IIB isoform X6

    UniProtKB/TrEMBL
    A0A7N4PFF6
    Conserved Domains (2) summary
    cd07541
    Location:4 → 836
    P-type_ATPase_APLT_Neo1-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Neo1p and human putative APLT, ATP9B
    pfam13246
    Location:329 → 440
    Cation_ATPase; Cation transport ATPase (P-type)

  6. XM_031946735.1 → XP_031802595.1  probable phospholipid-transporting ATPase IIB isoform X6

    UniProtKB/TrEMBL
    A0A7N4PFF6
    Conserved Domains (2) summary
    cd07541
    Location:4 → 836
    P-type_ATPase_APLT_Neo1-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Neo1p and human putative APLT, ATP9B
    pfam13246
    Location:329 → 440
    Cation_ATPase; Cation transport ATPase (P-type)

  7. XM_031946734.1 → XP_031802594.1  probable phospholipid-transporting ATPase IIB isoform X5

    UniProtKB/TrEMBL
    A0A7N4PFF6
    Conserved Domains (2) summary
    cd07541
    Location:21 → 854
    P-type_ATPase_APLT_Neo1-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Neo1p and human putative APLT, ATP9B
    pfam13246
    Location:347 → 458
    Cation_ATPase; Cation transport ATPase (P-type)
Nucleotide Protein
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