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AKIRIN2 akirin 2 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100916819, updated on 8-Mar-2024

Summary

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Gene symbol
AKIRIN2
Gene description
akirin 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 4 NC_045429.1 (219520913..219549343)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 4 Unlocalized Scaffold NW_003838928.1 (870241..908684, complement)

Chromosome 4 - NC_045429.1Genomic Context describing neighboring genes Neighboring gene cannabinoid receptor 1 Neighboring gene sperm acrosome associated 1 Neighboring gene origin recognition complex subunit 3 Neighboring gene arginyl-tRNA synthetase 2, mitochondrial Neighboring gene solute carrier family 35 member A1 Neighboring gene cilia and flagella associated protein 206

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
akirin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045429.1 Reference mSarHar1.11 Primary Assembly

    Range
    219520913..219549343
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031964546.1 → XP_031820406.1  akirin-2 isoform X1

    Conserved Domains (1) summary
    cl41779
    Location:2 → 203
    akirin

  2. XM_031964547.1 → XP_031820407.1  akirin-2 isoform X2

    Conserved Domains (1) summary
    cl41779
    Location:62 → 193
    akirin
Nucleotide Protein
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