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CCDC180 coiled-coil domain containing 180 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100895794, updated on 6-Jun-2024

Summary

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Gene symbol
CCDC180
Gene description
coiled-coil domain containing 180
See related
Ensembl:ENSCJAG00000010698
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
43
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 1 NC_071442.1 (142492857..142561406)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 1 NC_048383.1 (143738529..143807439)

Chromosome 1 - NC_071442.1Genomic Context describing neighboring genes Neighboring gene insulin like growth factor binding protein like 1 Neighboring gene stimulated by retinoic acid gene 6 protein-like Neighboring gene armadillo repeat-containing protein 8-like Neighboring gene uncharacterized LOC118143140 Neighboring gene translation initiation factor IF-2-like Neighboring gene tudor domain containing 7 Neighboring gene uncharacterized LOC118143148

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
coiled-coil domain-containing protein 180
Names
stimulated by retinoic acid gene 6 protein homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071442.1 Reference mCalJa1.2.pat.X

    Range
    142492857..142561406
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035252553.2 → XP_035108444.2  coiled-coil domain-containing protein 180 isoform X1

    UniProtKB/TrEMBL
    F6WXU0

  2. XM_035252568.2 → XP_035108459.2  coiled-coil domain-containing protein 180 isoform X3

    UniProtKB/TrEMBL
    F6WXU0

  3. XM_035252573.2 → XP_035108464.2  coiled-coil domain-containing protein 180 isoform X4

    UniProtKB/TrEMBL
    F6WXU0

  4. XM_035252596.2 → XP_035108487.2  coiled-coil domain-containing protein 180 isoform X6

    UniProtKB/TrEMBL
    F6WXU0

  5. XM_035252579.2 → XP_035108470.2  coiled-coil domain-containing protein 180 isoform X5

    UniProtKB/TrEMBL
    F6WXU0

  6. XM_035252560.2 → XP_035108451.2  coiled-coil domain-containing protein 180 isoform X2

    UniProtKB/TrEMBL
    F6WXU0

  7. XM_035252614.2 → XP_035108505.2  coiled-coil domain-containing protein 180 isoform X7

    UniProtKB/TrEMBL
    F6WXU0

  8. XM_035252620.2 → XP_035108511.2  coiled-coil domain-containing protein 180 isoform X8

    UniProtKB/TrEMBL
    F6WXU0

  9. XM_035252637.2 → XP_035108528.2  coiled-coil domain-containing protein 180 isoform X11

  10. XM_035252648.2 → XP_035108539.2  coiled-coil domain-containing protein 180 isoform X12

  11. XM_035252651.2 → XP_035108542.2  coiled-coil domain-containing protein 180 isoform X13

    UniProtKB/TrEMBL
    F6WXU0

  12. XM_035252626.2 → XP_035108517.2  coiled-coil domain-containing protein 180 isoform X9

    UniProtKB/TrEMBL
    F6WXU0

  13. XM_054258010.1 → XP_054113985.1  coiled-coil domain-containing protein 180 isoform X10

    UniProtKB/TrEMBL
    F6WXU0

RNA

  1. XR_004727291.2 RNA Sequence

  2. XR_008482305.1 RNA Sequence

  3. XR_004727300.2 RNA Sequence

  4. XR_004727298.2 RNA Sequence

  5. XR_008482306.1 RNA Sequence

  6. XR_008482309.1 RNA Sequence

  7. XR_004727301.2 RNA Sequence

  8. XR_008482310.1 RNA Sequence

  9. XR_008482311.1 RNA Sequence

Nucleotide Protein
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