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GABRG1 gamma-aminobutyric acid type A receptor subunit gamma1 [ Canis lupus familiaris (dog) ]

Gene ID: 100856619, updated on 8-Mar-2024

Summary

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Official Symbol
GABRG1provided by VGNC
Official Full Name
gamma-aminobutyric acid type A receptor subunit gamma1provided by VGNC
Primary source
VGNC:VGNC:41063
See related
Ensembl:ENSCAFG00845015632
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
11
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 13 NC_051817.1 (42802382..42881664, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 13 NC_006595.4 (42147102..42226119, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 13 NC_049234.1 (42891593..42972762, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 13 NC_049273.1 (42478701..42559787, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 13 NC_049754.1 (42542428..42621417, complement)

Chromosome 13 - NC_051817.1Genomic Context describing neighboring genes Neighboring gene U2 spliceosomal RNA Neighboring gene uncharacterized LOC111098468 Neighboring gene uncharacterized LOC111098467 Neighboring gene uncharacterized LOC119864646 Neighboring gene gamma-aminobutyric acid type A receptor subunit alpha2 Neighboring gene uncharacterized LOC119864645

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GABA-A receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GABA-gated chloride ion channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables benzodiazepine receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables inhibitory extracellular ligand-gated monoatomic ion channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chloride transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in gamma-aminobutyric acid signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of postsynaptic membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic transmission, GABAergic IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of GABA-A receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in dendrite membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynapse IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gamma-aminobutyric acid receptor subunit gamma-1
Names
gamma-aminobutyric acid (GABA) A receptor, gamma 1
gamma-aminobutyric acid type A receptor gamma1 subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051817.1 Reference ROS_Cfam_1.0

    Range
    42802382..42881664 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038685530.1 → XP_038541458.1  gamma-aminobutyric acid receptor subunit gamma-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JR68, A0A8C0RIQ2, A0A8I3NLX4
    Related
    ENSCAFP00845021933.1, ENSCAFT00845027865.1
    Conserved Domains (2) summary
    TIGR00860
    Location:69 → 465
    LIC; Cation transporter family protein
    cd19000
    Location:91 → 272
    LGIC_ECD_GABAAR_G; extracellular domain of gamma-aminobutyric acid receptor subunit gamma

  2. XM_038685531.1 → XP_038541459.1  gamma-aminobutyric acid receptor subunit gamma-1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0JR68, A0A8C0N7E7
    Conserved Domains (2) summary
    TIGR00860
    Location:42 → 438
    LIC; Cation transporter family protein
    cd19000
    Location:64 → 245
    LGIC_ECD_GABAAR_G; extracellular domain of gamma-aminobutyric acid receptor subunit gamma

  3. XM_038685532.1 → XP_038541460.1  gamma-aminobutyric acid receptor subunit gamma-1 isoform X3

    Conserved Domains (3) summary
    TIGR00860
    Location:12 → 333
    LIC; Cation transporter family protein
    cd03558
    Location:59 → 73
    LGIC_ECD; Cys-loop [structural motif]
    cl28912
    Location:1 → 140
    LGIC_ECD; extracellular domain (ECD) of Cys-loop neurotransmitter-gated ion channels (also known as ligand-gated ion channel (LGIC))

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049273.1 Alternate UMICH_Zoey_3.1

    Range
    42478701..42559787 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038493671.1 → XP_038349599.1  gamma-aminobutyric acid receptor subunit gamma-1 isoform X1

  2. XM_038493672.1 → XP_038349600.1  gamma-aminobutyric acid receptor subunit gamma-1 isoform X2

  3. XM_038493673.1 → XP_038349601.1  gamma-aminobutyric acid receptor subunit gamma-1 isoform X3

    Conserved Domains (3) summary
    TIGR00860
    Location:12 → 333
    LIC; Cation transporter family protein
    cd03558
    Location:59 → 73
    LGIC_ECD; Cys-loop [structural motif]
    cl28912
    Location:1 → 140
    LGIC_ECD; extracellular domain (ECD) of Cys-loop neurotransmitter-gated ion channels (also known as ligand-gated ion channel (LGIC))

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049754.1 Alternate UNSW_CanFamBas_1.0

    Range
    42542428..42621417 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038619937.1 → XP_038475865.1  gamma-aminobutyric acid receptor subunit gamma-1 isoform X1

  2. XM_038619938.1 → XP_038475866.1  gamma-aminobutyric acid receptor subunit gamma-1 isoform X2

  3. XM_038619939.1 → XP_038475867.1  gamma-aminobutyric acid receptor subunit gamma-1 isoform X3

    Conserved Domains (3) summary
    TIGR00860
    Location:12 → 333
    LIC; Cation transporter family protein
    cd03558
    Location:59 → 73
    LGIC_ECD; Cys-loop [structural motif]
    cl28912
    Location:1 → 140
    LGIC_ECD; extracellular domain (ECD) of Cys-loop neurotransmitter-gated ion channels (also known as ligand-gated ion channel (LGIC))

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049234.1 Alternate UU_Cfam_GSD_1.0

    Range
    42891593..42972762 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038555986.1 → XP_038411914.1  gamma-aminobutyric acid receptor subunit gamma-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JR68, A0A8C0RIQ2, A0A8I3NLX4
    Conserved Domains (2) summary
    TIGR00860
    Location:69 → 465
    LIC; Cation transporter family protein
    cd19000
    Location:91 → 272
    LGIC_ECD_GABAAR_G; extracellular domain of gamma-aminobutyric acid receptor subunit gamma

  2. XM_038555987.1 → XP_038411915.1  gamma-aminobutyric acid receptor subunit gamma-1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0JR68, A0A8C0N7E7
    Conserved Domains (2) summary
    TIGR00860
    Location:42 → 438
    LIC; Cation transporter family protein
    cd19000
    Location:64 → 245
    LGIC_ECD_GABAAR_G; extracellular domain of gamma-aminobutyric acid receptor subunit gamma

  3. XM_038555988.1 → XP_038411916.1  gamma-aminobutyric acid receptor subunit gamma-1 isoform X3

    Conserved Domains (3) summary
    TIGR00860
    Location:12 → 333
    LIC; Cation transporter family protein
    cd03558
    Location:59 → 73
    LGIC_ECD; Cys-loop [structural motif]
    cl28912
    Location:1 → 140
    LGIC_ECD; extracellular domain (ECD) of Cys-loop neurotransmitter-gated ion channels (also known as ligand-gated ion channel (LGIC))

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006595.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    42147102..42226119 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003639456.5 → XP_003639504.2  gamma-aminobutyric acid receptor subunit gamma-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JR68, A0A8C0RIQ2, A0A8I3NLX4
    Conserved Domains (2) summary
    TIGR00860
    Location:69 → 465
    LIC; Cation transporter family protein
    cd19000
    Location:91 → 272
    LGIC_ECD_GABAAR_G; extracellular domain of gamma-aminobutyric acid receptor subunit gamma

  2. XM_022426953.2 → XP_022282661.1  gamma-aminobutyric acid receptor subunit gamma-1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0JR68, A0A8C0N7E7
    Conserved Domains (2) summary
    TIGR00860
    Location:42 → 438
    LIC; Cation transporter family protein
    cd19000
    Location:64 → 245
    LGIC_ECD_GABAAR_G; extracellular domain of gamma-aminobutyric acid receptor subunit gamma

  3. XM_038429124.1 → XP_038285052.1  gamma-aminobutyric acid receptor subunit gamma-1 isoform X3

    Conserved Domains (3) summary
    TIGR00860
    Location:12 → 333
    LIC; Cation transporter family protein
    cd03558
    Location:59 → 73
    LGIC_ECD; Cys-loop [structural motif]
    cl28912
    Location:1 → 140
    LGIC_ECD; extracellular domain (ECD) of Cys-loop neurotransmitter-gated ion channels (also known as ligand-gated ion channel (LGIC))
Nucleotide Protein
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