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NT5DC2 5'-nucleotidase domain containing 2 [ Canis lupus familiaris (dog) ]

Gene ID: 100855678, updated on 8-Mar-2024

Summary

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Official Symbol
NT5DC2provided by VGNC
Official Full Name
5'-nucleotidase domain containing 2provided by VGNC
Primary source
VGNC:VGNC:43998
See related
Ensembl:ENSCAFG00845030174
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See NT5DC2 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
15
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 20 NC_051824.1 (37590578..37599325)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 20 NC_006602.4 (37222956..37231703)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 20 NC_049241.1 (37642003..37650749)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 20 NC_049280.1 (36955136..36963877)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 20 NC_049761.1 (37363767..37372505)

Chromosome 20 - NC_051824.1Genomic Context describing neighboring genes Neighboring gene polybromo 1 Neighboring gene U4 spliceosomal RNA Neighboring gene ubiquinol-cytochrome c reductase complex assembly factor 5 Neighboring gene stabilin 1 Neighboring gene nischarin Neighboring gene troponin C1, slow skeletal and cardiac type

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5'-nucleotidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
5'-nucleotidase domain-containing protein 2; LOW QUALITY PROTEIN: 5'-nucleotidase domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051824.1 Reference ROS_Cfam_1.0

    Range
    37590578..37599325
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038427554.1 → XP_038283482.1  5'-nucleotidase domain-containing protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C0JNK6, A0A8C0MGD9, A0A8P0NBC9
    Related
    ENSCAFP00845042172.1, ENSCAFT00845053673.1
    Conserved Domains (1) summary
    pfam05761
    Location:101 → 533
    5_nucleotid; 5' nucleotidase family

  2. XM_038427556.1 → XP_038283484.1  5'-nucleotidase domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JN16
    Conserved Domains (1) summary
    pfam05761
    Location:52 → 484
    5_nucleotid; 5' nucleotidase family

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049280.1 Alternate UMICH_Zoey_3.1

    Range
    36955136..36963877
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038503257.1 → XP_038359185.1  5'-nucleotidase domain-containing protein 2 isoform X2

    Conserved Domains (1) summary
    pfam05761
    Location:101 → 533
    5_nucleotid; 5' nucleotidase family

  2. XM_038503258.1 → XP_038359186.1  5'-nucleotidase domain-containing protein 2 isoform X1

    Conserved Domains (1) summary
    pfam05761
    Location:52 → 484
    5_nucleotid; 5' nucleotidase family

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049761.1 Alternate UNSW_CanFamBas_1.0

    Range
    37363767..37372505
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038630397.1 → XP_038486325.1  LOW QUALITY PROTEIN: 5'-nucleotidase domain-containing protein 2 isoform X2

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049241.1 Alternate UU_Cfam_GSD_1.0

    Range
    37642003..37650749
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038566234.1 → XP_038422162.1  5'-nucleotidase domain-containing protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C0JNK6, A0A8C0MGD9, A0A8P0NBC9
    Conserved Domains (1) summary
    pfam05761
    Location:101 → 533
    5_nucleotid; 5' nucleotidase family

  2. XM_038566235.1 → XP_038422163.1  5'-nucleotidase domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JN16
    Conserved Domains (1) summary
    pfam05761
    Location:52 → 484
    5_nucleotid; 5' nucleotidase family

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    37222956..37231703
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038455125.1 → XP_038311053.1  5'-nucleotidase domain-containing protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C0JNK6, A0A8C0MGD9, A0A8P0NBC9
    Conserved Domains (1) summary
    pfam05761
    Location:101 → 533
    5_nucleotid; 5' nucleotidase family

  2. XM_022406639.2 → XP_022262347.1  5'-nucleotidase domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JN16
    Conserved Domains (1) summary
    pfam05761
    Location:52 → 484
    5_nucleotid; 5' nucleotidase family
Nucleotide Protein
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