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Clptm1l CLPTM1 like [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100773964, updated on 8-Mar-2024

Summary

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Gene symbol
Clptm1l
Gene description
CLPTM1 like
See related
Ensembl:ENSCGRG00015008494
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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See Clptm1l in Genome Data Viewer
Location:
chromosome: 2
Exon count:
18
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003617241.1 (37751..54299)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (368275467..368292083)

NW_003617241.1Genomic Context describing neighboring genes Neighboring gene sodium-dependent dopamine transporter Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC113831681 Neighboring gene telomerase reverse transcriptase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cleft lip and palate transmembrane protein 1-like protein
Names
Cleft lip and palate transmembrane protein 1-like protein
cleft lip and palate transmembrane protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003617241.1 Reference CriGri_1.0 Primary Assembly

    Range
    37751..54299
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003515017.5 → XP_003515065.1  cleft lip and palate transmembrane protein 1-like protein isoform X3

    See identical proteins and their annotated locations for XP_003515065.1

    UniProtKB/TrEMBL
    A0A8C2MDM1, G3IKL1
    Conserved Domains (1) summary
    pfam05602
    Location:22 → 422
    CLPTM1; Cleft lip and palate transmembrane protein 1 (CLPTM1)

  2. XM_007655041.4 → XP_007653231.1  cleft lip and palate transmembrane protein 1-like protein isoform X4

    UniProtKB/TrEMBL
    A0A8C2MDM1
    Conserved Domains (1) summary
    pfam05602
    Location:22 → 421
    CLPTM1; Cleft lip and palate transmembrane protein 1 (CLPTM1)

  3. XM_035438128.1 → XP_035294019.1  cleft lip and palate transmembrane protein 1-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C2MDM1
    Conserved Domains (1) summary
    pfam05602
    Location:22 → 423
    CLPTM1; Cleft lip and palate transmembrane protein 1 (CLPTM1)

  4. XM_035438129.1 → XP_035294020.1  cleft lip and palate transmembrane protein 1-like protein isoform X2

    UniProtKB/TrEMBL
    A0A8C2MDM1
    Conserved Domains (1) summary
    pfam05602
    Location:22 → 422
    CLPTM1; Cleft lip and palate transmembrane protein 1 (CLPTM1)

RNA

  1. XR_004767740.1 RNA Sequence

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048595.1 Alternate CriGri-PICRH-1.0

    Range
    368275467..368292083
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027400134.2 → XP_027255935.1  cleft lip and palate transmembrane protein 1-like protein isoform X2

    UniProtKB/TrEMBL
    A0A8C2MDM1, A0A9J7JEM7

  2. XM_027400133.2 → XP_027255934.1  cleft lip and palate transmembrane protein 1-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C2MDM1, A0A9J7J902

  3. XM_027400136.2 → XP_027255937.1  cleft lip and palate transmembrane protein 1-like protein isoform X4

    UniProtKB/TrEMBL
    A0A8C2MDM1, A0A9J7FC10

  4. XM_027400135.2 → XP_027255936.1  cleft lip and palate transmembrane protein 1-like protein isoform X3

    UniProtKB/TrEMBL
    A0A8C2M9N1, A0A8C2MDM1
    Related
    ENSCGRP00015011018.1, ENSCGRT00015013519.2

RNA

  1. XR_003482151.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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