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Ewsr1 EWS RNA binding protein 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100773033, updated on 8-Mar-2024

Summary

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Gene symbol
Ewsr1
Gene description
EWS RNA binding protein 1
See related
Ensembl:ENSCGRG00015002923
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
18
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614142.1 (442272..470219)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276807.1 (99799799..99827513)

NW_003614142.1Genomic Context describing neighboring genes Neighboring gene EMI domain containing 1 Neighboring gene rhomboid domain containing 3 Neighboring gene U6 spliceosomal RNA Neighboring gene growth arrest specific 2 like 1 Neighboring gene RAS like family 10 member A Neighboring gene small nucleolar RNA SNORD125 Neighboring gene adaptor related protein complex 1 subunit beta 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA-binding protein EWS
Names
Ewing sarcoma breakpoint region 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614142.1 Reference CriGri_1.0 Primary Assembly

    Range
    442272..470219
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007645833.4 → XP_007644023.1  RNA-binding protein EWS isoform X4

    See identical proteins and their annotated locations for XP_007644023.1

    UniProtKB/TrEMBL
    A0A8C2LNU0
    Conserved Domains (1) summary
    PRK14949
    Location:10 → 137
    PRK14949; DNA polymerase III subunits gamma and tau; Provisional

  2. XM_027438595.2 → XP_027294396.1  RNA-binding protein EWS isoform X3

    UniProtKB/TrEMBL
    A0A8C2LKY6, A0A9J7J5W6

  3. XM_007645832.4 → XP_007644022.1  RNA-binding protein EWS isoform X1

    See identical proteins and their annotated locations for XP_007644022.1

    UniProtKB/TrEMBL
    A0A061IQA7, G3HP03
    Conserved Domains (4) summary
    COG0724
    Location:354 → 455
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12533
    Location:361 → 444
    RRM_EWS; RNA recognition motif in vertebrate Ewing Sarcoma Protein (EWS)
    sd00025
    Location:522 → 543
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam00641
    Location:518 → 547
    zf-RanBP; Zn-finger in Ran binding protein and others

  4. XM_003505316.5 → XP_003505364.1  RNA-binding protein EWS isoform X2

    See identical proteins and their annotated locations for XP_003505364.1

    UniProtKB/TrEMBL
    A0A061INS4, A0A061IQA7
    Conserved Domains (4) summary
    COG0724
    Location:353 → 454
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12533
    Location:360 → 443
    RRM_EWS; RNA recognition motif in vertebrate Ewing Sarcoma Protein (EWS)
    sd00025
    Location:521 → 542
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam00641
    Location:517 → 546
    zf-RanBP; Zn-finger in Ran binding protein and others

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276807.1 Alternate CriGri-PICRH-1.0

    Range
    99799799..99827513
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027387364.2 → XP_027243165.1  RNA-binding protein EWS isoform X4

    UniProtKB/TrEMBL
    A0A8C2LNU0
    Related
    ENSCGRP00015004756.1, ENSCGRT00015005871.2

  2. XM_027387363.2 → XP_027243164.1  RNA-binding protein EWS isoform X3

    UniProtKB/TrEMBL
    A0A8C2LKY6, A0A9J7J5W6

  3. XM_027387361.2 → XP_027243162.1  RNA-binding protein EWS isoform X1

    UniProtKB/TrEMBL
    A0A061IQA7, G3HP03
    Related
    ENSCGRP00015004721.2, ENSCGRT00015005830.2

  4. XM_027387362.2 → XP_027243163.1  RNA-binding protein EWS isoform X2

    UniProtKB/TrEMBL
    A0A061INS4, A0A061IQA7
    Related
    ENSCGRP00015004605.2, ENSCGRT00015005696.2
Nucleotide Protein Strain
Heading Accession and Version

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