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Ccsap centriole, cilia and spindle associated protein [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100769539, updated on 8-Mar-2024

Summary

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Gene symbol
Ccsap
Gene description
centriole, cilia and spindle associated protein
See related
Ensembl:ENSCGRG00015009701
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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See Ccsap in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613636.1 (3294739..3312006)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (200521182..200538518, complement)

NW_003613636.1Genomic Context describing neighboring genes Neighboring gene nucleoporin 133 Neighboring gene actin alpha 1, skeletal muscle Neighboring gene small nuclear ribonucleoprotein E Neighboring gene RAB4A, member RAS oncogene family Neighboring gene ras homolog family member U

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of mitotic spindle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in axoneme IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in centriole IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ciliary transition zone IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in spindle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
centriole, cilia and spindle-associated protein
Names
Uncharacterized protein C1orf96-like
uncharacterized protein C1orf96 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613636.1 Reference CriGri_1.0 Primary Assembly

    Range
    3294739..3312006
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003496824.5 → XP_003496872.1  centriole, cilia and spindle-associated protein

    See identical proteins and their annotated locations for XP_003496872.1

    UniProtKB/TrEMBL
    A0A061IBZ0, G3GX24
    Conserved Domains (1) summary
    pfam15748
    Location:7 → 250
    CCSAP; Centriole, cilia and spindle-associated

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    200521182..200538518 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027404864.2 → XP_027260665.1  centriole, cilia and spindle-associated protein

    UniProtKB/TrEMBL
    A0A061IBZ0, A0A9J7FLK6
    Related
    ENSCGRP00015012658.1, ENSCGRT00015015492.2
Nucleotide Protein Strain
Heading Accession and Version

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