Format

Send to:

Choose Destination

CCSAP centriole, cilia and spindle associated protein [ Homo sapiens (human) ]

Gene ID: 126731, updated on 2-Mar-2021

Summary

Official Symbol
CCSAPprovided by HGNC
Official Full Name
centriole, cilia and spindle associated proteinprovided by HGNC
Primary source
HGNC:HGNC:29578
See related
Ensembl:ENSG00000154429 MIM:616762
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CSAP; C1orf96
Expression
Broad expression in brain (RPKM 20.5), placenta (RPKM 8.3) and 20 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See CCSAP in Genome Data Viewer
Location:
1q42.13
Exon count:
4
Annotation release Status Assembly Chr Location
109.20210226 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (229321015..229343795, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (229456762..229478794, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102723935 Neighboring gene uncharacterized LOC105373159 Neighboring gene RAB4A, member RAS oncogene family Neighboring gene RNA, U6 small nuclear 180, pseudogene Neighboring gene RN7SK pseudogene 276

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ37296, FLJ41471

Gene Ontology Provided by GOA

Function Evidence Code Pubs
microtubule binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
microtubule binding IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
cell cycle IEA
Inferred from Electronic Annotation
more info
 
cell division IEA
Inferred from Electronic Annotation
more info
 
mitotic spindle microtubule depolymerization IDA
Inferred from Direct Assay
more info
PubMed 
multicellular organism development IEA
Inferred from Electronic Annotation
more info
 
regulation of cilium beat frequency involved in ciliary motility ISS
Inferred from Sequence or Structural Similarity
more info
 
regulation of embryonic development ISS
Inferred from Sequence or Structural Similarity
more info
 
regulation of mitotic spindle assembly IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
regulation of mitotic spindle assembly IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
axon IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
axon IDA
Inferred from Direct Assay
more info
PubMed 
axoneme IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
axoneme IDA
Inferred from Direct Assay
more info
PubMed 
centriole IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
centriole IDA
Inferred from Direct Assay
more info
PubMed 
centrosome IDA
Inferred from Direct Assay
more info
PubMed 
ciliary basal body IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
ciliary basal body IDA
Inferred from Direct Assay
more info
PubMed 
ciliary transition zone IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
ciliary transition zone IDA
Inferred from Direct Assay
more info
PubMed 
cilium IDA
Inferred from Direct Assay
more info
PubMed 
mitotic spindle IDA
Inferred from Direct Assay
more info
PubMed 
mitotic spindle astral microtubule IDA
Inferred from Direct Assay
more info
PubMed 
spindle IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
spindle IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
centriole, cilia and spindle-associated protein
Names
centriole and spindle-associated protein

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_145257.5NP_660300.3  centriole, cilia and spindle-associated protein

    See identical proteins and their annotated locations for NP_660300.3

    Status: VALIDATED

    Source sequence(s)
    AL117350, BC015419, BC071609, KF455154
    Consensus CDS
    CCDS1577.1
    UniProtKB/Swiss-Prot
    Q6IQ19
    Related
    ENSP00000284617.2, ENST00000284617.7
    Conserved Domains (1) summary
    pfam15748
    Location:7269
    CCSAP; Centriole, cilia and spindle-associated

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210226

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    229321015..229343795 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024453055.1XP_024308823.1  centriole, cilia and spindle-associated protein isoform X1

    Conserved Domains (1) summary
    pfam15748
    Location:754
    CCSAP; Centriole, cilia and spindle-associated

RNA

  1. XR_001736958.2 RNA Sequence

Support Center