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Rai1 retinoic acid induced 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100768243, updated on 8-Mar-2024

Summary

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Gene symbol
Rai1
Gene description
retinoic acid induced 1
Locus tag
I79_010154
See related
Ensembl:ENSCGRG00015017516
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
6
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613960.1 (1451992..1507430)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 7 NC_048600.1 (74232551..74333270)

NW_003613960.1Genomic Context describing neighboring genes Neighboring gene ras related dexamethasone induced 1 Neighboring gene phosphatidylethanolamine N-methyltransferase Neighboring gene dnaJ homolog subfamily A member 1-like Neighboring gene 40S ribosomal protein S15a-like Neighboring gene sterol regulatory element binding transcription factor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in circadian regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
retinoic acid-induced protein 1
Names
Retinoic acid-induced protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613960.1 Reference CriGri_1.0 Primary Assembly

    Range
    1451992..1507430
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035456473.1 → XP_035312364.1  retinoic acid-induced protein 1 isoform X1

    UniProtKB/TrEMBL
    G3HHP8
    Conserved Domains (2) summary
    PHA03247
    Location:938 → 1357
    PHA03247; large tegument protein UL36; Provisional
    cl22851
    Location:1652 → 1875
    PHD_SF; PHD finger superfamily

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048600.1 Alternate CriGri-PICRH-1.0

    Range
    74232551..74333270
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027427310.2 → XP_027283111.1  retinoic acid-induced protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C2L945, G3HHP8
    Related
    ENSCGRP00015051647.1, ENSCGRT00015049269.1
    Conserved Domains (1) summary
    cl22851
    Location:1652 → 1875
    PHD_SF; PHD finger superfamily

  2. XM_027427308.2 → XP_027283109.1  retinoic acid-induced protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C2L945, G3HHP8
    Conserved Domains (1) summary
    cl22851
    Location:1652 → 1875
    PHD_SF; PHD finger superfamily

  3. XM_035447245.1 → XP_035303136.1  retinoic acid-induced protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C2L945, G3HHP8
    Conserved Domains (1) summary
    cl22851
    Location:1652 → 1875
    PHD_SF; PHD finger superfamily

  4. XM_027427311.2 → XP_027283112.1  retinoic acid-induced protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C2L945, G3HHP8
    Conserved Domains (1) summary
    cl22851
    Location:1652 → 1875
    PHD_SF; PHD finger superfamily
Nucleotide Protein Strain
Heading Accession and Version

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