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Acod1 aconitate decarboxylase 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100764165, updated on 8-Mar-2024

Summary

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Gene symbol
Acod1
Gene description
aconitate decarboxylase 1
Locus tag
I79_010295
See related
Ensembl:ENSCGRG00015034896
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Also known as
Irg1
Orthologs
human mouse all
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Genomic context

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See Acod1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613975.1 (1013979..1050494, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276807.1 (254697884..254704778)

NW_003613975.1Genomic Context describing neighboring genes Neighboring gene F-box and leucine rich repeat protein 3 Neighboring gene CLN5 intracellular trafficking protein Neighboring gene chloride intracellular channel protein 1-like Neighboring gene transfer RNA lysine (anticodon CUU)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cis-aconitate decarboxylase
Names
Immune-responsive gene 1 protein
immunoresponsive 1 homolog
immunoresponsive gene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613975.1 Reference CriGri_1.0 Primary Assembly

    Range
    1013979..1050494 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035456569.1 → XP_035312460.1  cis-aconitate decarboxylase isoform X1

    UniProtKB/TrEMBL
    A0A8C2MWU6
    Conserved Domains (1) summary
    pfam03972
    Location:19 → 461
    MmgE_PrpD; MmgE/PrpD family

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276807.1 Alternate CriGri-PICRH-1.0

    Range
    254697884..254704778
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035453121.1 → XP_035309012.1  cis-aconitate decarboxylase isoform X2

    UniProtKB/TrEMBL
    A0A8C2MWU6, A0A9J7HCF2
    Related
    ENSCGRP00015046566.1, ENSCGRT00015076655.1
    Conserved Domains (1) summary
    pfam03972
    Location:24 → 466
    MmgE_PrpD; MmgE/PrpD family
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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