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Arfip1 ADP ribosylation factor interacting protein 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100761181, updated on 8-Mar-2024

Summary

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Gene symbol
Arfip1
Gene description
ADP ribosylation factor interacting protein 1
See related
Ensembl:ENSCGRG00015024461
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Also known as
Arfaptin-1
Orthologs
human mouse all
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Genomic context

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See Arfip1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614183.1 (207242..294826, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276806.1 (69818770..69906538)

NW_003614183.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103163417 Neighboring gene FH2 domain containing 1 Neighboring gene tigger transposable element derived 4 Neighboring gene transmembrane protein 154

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein domain specific binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of Arp2/3 complex-mediated actin nucleation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in trans-Golgi network membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
arfaptin-1
Names
arfaptin-1-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614183.1 Reference CriGri_1.0 Primary Assembly

    Range
    207242..294826 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016977258.2 → XP_016832747.1  arfaptin-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2MWR0

  2. XM_016977255.3 → XP_016832744.1  arfaptin-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2MWR0

  3. XM_007646221.4 → XP_007644411.1  arfaptin-1 isoform X4

    See identical proteins and their annotated locations for XP_007644411.1

    UniProtKB/TrEMBL
    A0A8C2MWR0, A0A8C2N0W2
    Conserved Domains (1) summary
    cd07660
    Location:123 → 323
    BAR_Arfaptin; The Bin/Amphiphysin/Rvs (BAR) domain of Arfaptin

  4. XM_016977259.3 → XP_016832748.1  arfaptin-1 isoform X3

  5. XM_035457923.1 → XP_035313814.1  arfaptin-1 isoform X5

    Conserved Domains (1) summary
    cl12013
    Location:137 → 263
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

  6. XM_003505739.5 → XP_003505787.1  arfaptin-1 isoform X2

    See identical proteins and their annotated locations for XP_003505787.1

    UniProtKB/TrEMBL
    A0A8C2MWR0, G3HQA3
    Conserved Domains (1) summary
    cd07660
    Location:155 → 355
    BAR_Arfaptin; The Bin/Amphiphysin/Rvs (BAR) domain of Arfaptin

  7. XM_016977254.3 → XP_016832743.1  arfaptin-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2MWR0

  8. XM_016977257.3 → XP_016832746.1  arfaptin-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2MWR0

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276806.1 Alternate CriGri-PICRH-1.0

    Range
    69818770..69906538
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027392968.2 → XP_027248769.1  arfaptin-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2MWR0, A0A9J7F6V8

  2. XM_027392966.2 → XP_027248767.1  arfaptin-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2MWR0, A0A9J7F6V8

  3. XM_027392965.2 → XP_027248766.1  arfaptin-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2MWR0, A0A9J7F6V8
    Related
    ENSCGRP00015032429.1, ENSCGRT00015039578.2

  4. XM_027392970.2 → XP_027248771.1  arfaptin-1 isoform X2

    UniProtKB/TrEMBL
    A0A8C2MWR0, G3HQA3
    Related
    ENSCGRP00015032451.1, ENSCGRT00015039603.2

  5. XM_035450839.1 → XP_035306730.1  arfaptin-1 isoform X5

    UniProtKB/TrEMBL
    A0A9J7K2V4
    Related
    ENSCGRP00015042189.1, ENSCGRT00015078701.1
    Conserved Domains (1) summary
    cl12013
    Location:137 → 263
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

  6. XM_027392971.2 → XP_027248772.1  arfaptin-1 isoform X3

    UniProtKB/TrEMBL
    A0A9J7F5A7

  7. XM_027392972.2 → XP_027248773.1  arfaptin-1 isoform X4

    UniProtKB/TrEMBL
    A0A8C2MWR0, A0A8C2N0W2
    Related
    ENSCGRP00015032461.1, ENSCGRT00015039613.2

  8. XM_027392969.2 → XP_027248770.1  arfaptin-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2MWR0, A0A9J7F6V8
Nucleotide Protein Strain
Heading Accession and Version

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