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Rlim ring finger protein, LIM domain interacting [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100760995, updated on 8-Mar-2024

Summary

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Gene symbol
Rlim
Gene description
ring finger protein, LIM domain interacting
See related
Ensembl:ENSCGRG00015016829
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
4
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614235.1 (292312..312238)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) X NC_048604.1 (66587667..66607155)

NW_003614235.1Genomic Context describing neighboring genes Neighboring gene neurite extension and migration factor Neighboring gene 60S ribosomal protein L27-like Neighboring gene solute carrier family 16 member 2 Neighboring gene 40S ribosomal protein S2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in random inactivation of X chromosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase RLIM

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614235.1 Reference CriGri_1.0 Primary Assembly

    Range
    292312..312238
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003506385.3 → XP_003506433.1  E3 ubiquitin-protein ligase RLIM

    See identical proteins and their annotated locations for XP_003506433.1

    UniProtKB/TrEMBL
    G3HSB5
    Conserved Domains (1) summary
    pfam13639
    Location:548 → 590
    zf-RING_2; Ring finger domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048604.1 Alternate CriGri-PICRH-1.0

    Range
    66587667..66607155
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027433071.2 → XP_027288872.1  E3 ubiquitin-protein ligase RLIM

    UniProtKB/TrEMBL
    A0A3L7H2I4
    Related
    ENSCGRP00015022077.2, ENSCGRT00015027106.2

  2. XM_027433072.2 → XP_027288873.1  E3 ubiquitin-protein ligase RLIM

    UniProtKB/TrEMBL
    A0A3L7H2I4
Nucleotide Protein Strain
Heading Accession and Version

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