U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Pacsin1 protein kinase C and casein kinase substrate in neurons 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100759729, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Pacsin1
Gene description
protein kinase C and casein kinase substrate in neurons 1
Locus tag
I79_013630
See related
Ensembl:ENSCGRG00015014093
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614227.1 (583878..624514, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276806.1 (232806680..232851111)

NW_003614227.1Genomic Context describing neighboring genes Neighboring gene inflammation and lipid regulator with UBA-like and NBR1-like domains Neighboring gene SAM pointed domain containing ETS transcription factor Neighboring gene diphosphoinositol polyphosphate phosphohydrolase 1 Neighboring gene ribosomal protein S10

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron projection morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plasma membrane tubulation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of dendrite development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
protein kinase C and casein kinase substrate in neurons protein 1
Names
Protein kinase C and casein kinase substrate in neurons protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614227.1 Reference CriGri_1.0 Primary Assembly

    Range
    583878..624514 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035458291.1 → XP_035314182.1  protein kinase C and casein kinase substrate in neurons protein 1 isoform X1

    UniProtKB/TrEMBL
    G3HS05
    Conserved Domains (2) summary
    cd07680
    Location:16 → 273
    F-BAR_PACSIN1; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Protein kinase C and Casein kinase Substrate in Neurons 1 (PACSIN1)
    cl17036
    Location:385 → 434
    SH3; Src Homology 3 domain superfamily

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276806.1 Alternate CriGri-PICRH-1.0

    Range
    232806680..232851111
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027389010.2 → XP_027244811.1  protein kinase C and casein kinase substrate in neurons protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A3L7IN18, G3HS05
    Related
    ENSCGRP00015018334.1, ENSCGRT00015022547.2
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials