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Nr2c1 nuclear receptor subfamily 2 group C member 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100757017, updated on 8-Mar-2024

Summary

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Gene symbol
Nr2c1
Gene description
nuclear receptor subfamily 2 group C member 1
See related
Ensembl:ENSCGRG00015020789
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613849.1 (1689060..1744733)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276806.1 (160158185..160214285)

NW_003613849.1Genomic Context describing neighboring genes Neighboring gene vezatin, adherens junctions transmembrane protein Neighboring gene FYVE, RhoGEF and PH domain containing 6 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC118239477 Neighboring gene NADH:ubiquinone oxidoreductase subunit A12

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear receptor subfamily 2 group C member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613849.1 Reference CriGri_1.0 Primary Assembly

    Range
    1689060..1744733
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003501426.4 → XP_003501474.1  nuclear receptor subfamily 2 group C member 1

    See identical proteins and their annotated locations for XP_003501474.1

    UniProtKB/TrEMBL
    G3HBK3
    Conserved Domains (2) summary
    cd06952
    Location:355 → 576
    NR_LBD_TR2_like; The ligand binding domain of the orphan nuclear receptors TR4 and TR2
    cd06967
    Location:96 → 182
    NR_DBD_TR2_like; DNA-binding domain of the TR2 and TR4 (human testicular receptor 2 and 4) is composed of two C4-type zinc fingers

  2. XM_007642090.4 → XP_007640280.1  nuclear receptor subfamily 2 group C member 1

    See identical proteins and their annotated locations for XP_007640280.1

    UniProtKB/TrEMBL
    G3HBK3
    Conserved Domains (2) summary
    cd06952
    Location:355 → 576
    NR_LBD_TR2_like; The ligand binding domain of the orphan nuclear receptors TR4 and TR2
    cd06967
    Location:96 → 182
    NR_DBD_TR2_like; DNA-binding domain of the TR2 and TR4 (human testicular receptor 2 and 4) is composed of two C4-type zinc fingers

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276806.1 Alternate CriGri-PICRH-1.0

    Range
    160158185..160214285
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027392648.2 → XP_027248449.1  nuclear receptor subfamily 2 group C member 1

    UniProtKB/TrEMBL
    G3HBK3
    Related
    ENSCGRP00015027551.2, ENSCGRT00015033746.2

  2. XM_027392649.2 → XP_027248450.1  nuclear receptor subfamily 2 group C member 1

    UniProtKB/TrEMBL
    G3HBK3
Nucleotide Protein Strain
Heading Accession and Version

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