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Ryr3 ryanodine receptor 3 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100751569, updated on 8-Mar-2024

Summary

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Gene symbol
Ryr3
Gene description
ryanodine receptor 3
Locus tag
I79_010444
See related
Ensembl:ENSCGRG00015005587
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
99
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613982.1 (523144..830097, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 6 NC_048599.1 (65281633..65747093)

NW_003613982.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA11 Neighboring gene apoptosis and caspase activation inhibitor Neighboring gene dynein light chain roadblock-type 1-like Neighboring gene transmembrane and coiled-coil domain-containing protein 5B Neighboring gene uncharacterized LOC118239101

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ryanodine-sensitive calcium-release channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular calcium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Z disc IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of calcium channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in smooth endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: ryanodine receptor 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613982.1 Reference CriGri_1.0 Primary Assembly

    Range
    523144..830097 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035456626.1 → XP_035312517.1  LOW QUALITY PROTEIN: ryanodine receptor 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C2QME6
    Conserved Domains (11) summary
    cd12877
    Location:519 → 670
    SPRY1_RyR; SPRY domain 1 (SPRY1) of ryanodine receptor (RyR)
    cd12878
    Location:951 → 1083
    SPRY2_RyR; SPRY domain 2 (SPRY2) of ryanodine receptor (RyR)
    cd12879
    Location:1203 → 1341
    SPRY3_RyR; SPRY domain 3 (SPRY3) of ryanodine receptor (RyR)
    pfam00520
    Location:4498 → 4658
    Ion_trans; Ion transport protein
    pfam01365
    Location:318 → 499
    RYDR_ITPR; RIH domain
    pfam02026
    Location:727 → 815
    RyR; RyR domain
    pfam02815
    Location:94 → 275
    MIR; MIR domain
    pfam06459
    Location:4112 → 4381
    RR_TM4-6; Ryanodine Receptor TM 4-6
    pfam08454
    Location:3603 → 3720
    RIH_assoc; RyR and IP3R Homology associated
    pfam13499
    Location:3804 → 3859
    EF-hand_7; EF-hand domain pair
    cl19745
    Location:23 → 90
    Ins145_P3_rec; Inositol 1,4,5-trisphosphate/ryanodine receptor

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048599.1 Alternate CriGri-PICRH-1.0

    Range
    65281633..65747093
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035447052.1 → XP_035302943.1  LOW QUALITY PROTEIN: ryanodine receptor 3 isoform X2

    UniProtKB/TrEMBL
    A0A8C2QME6, A0A9J7H396
    Related
    ENSCGRP00015009161.2, ENSCGRT00015011264.2
    Conserved Domains (11) summary
    cd12877
    Location:867 → 1018
    SPRY1_RyR; SPRY domain 1 (SPRY1) of ryanodine receptor (RyR)
    cd12878
    Location:1299 → 1431
    SPRY2_RyR; SPRY domain 2 (SPRY2) of ryanodine receptor (RyR)
    cd12879
    Location:1551 → 1689
    SPRY3_RyR; SPRY domain 3 (SPRY3) of ryanodine receptor (RyR)
    pfam00520
    Location:4846 → 5006
    Ion_trans; Ion transport protein
    pfam01365
    Location:666 → 847
    RYDR_ITPR; RIH domain
    pfam02026
    Location:1075 → 1163
    RyR; RyR domain
    pfam02815
    Location:442 → 623
    MIR; MIR domain
    pfam06459
    Location:4460 → 4729
    RR_TM4-6; Ryanodine Receptor TM 4-6
    pfam08454
    Location:3951 → 4068
    RIH_assoc; RyR and IP3R Homology associated
    pfam13499
    Location:4152 → 4207
    EF-hand_7; EF-hand domain pair
    cl19745
    Location:242 → 438
    Ins145_P3_rec; Inositol 1,4,5-trisphosphate/ryanodine receptor
Nucleotide Protein Strain
Heading Accession and Version

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