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Snrpd2 small nuclear ribonucleoprotein D2 polypeptide [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100735810, updated on 8-Mar-2024

Summary

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Gene symbol
Snrpd2
Gene description
small nuclear ribonucleoprotein D2 polypeptide
See related
Ensembl:ENSCPOG00000035154
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947490.1 (23596285..23601416, complement)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176339.1 (6082798..6087898, complement)

NW_026947490.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134476870 Neighboring gene gastric inhibitory polypeptide receptor Neighboring gene glutaminyl-peptide cyclotransferase like Neighboring gene small ribosomal subunit protein eS6-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA splicing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spliceosomal snRNP assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U1 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U2 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U4/U6 x U5 tri-snRNP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U5 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of pICln-Sm protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of precatalytic spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
small nuclear ribonucleoprotein Sm D2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947490.1 Reference mCavPor4.1

    Range
    23596285..23601416 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003464584.4 → XP_003464632.1  small nuclear ribonucleoprotein Sm D2

    See identical proteins and their annotated locations for XP_003464632.1

    UniProtKB/TrEMBL
    A0A286Y2N6, H0W8B0
    Related
    ENSCPOP00000031973.1
    Conserved Domains (1) summary
    cd01720
    Location:24 → 113
    Sm_D2; Sm protein D2
Nucleotide Protein
Heading Accession and Version

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