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Pcgf1 polycomb group ring finger 1 [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100735183, updated on 8-Mar-2024

Summary

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Gene symbol
Pcgf1
Gene description
polycomb group ring finger 1
See related
Ensembl:ENSCPOG00000012729
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947501.1 (28205521..28207909, complement)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176382.1 (14723550..14725879)

NW_026947501.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 142 Neighboring gene tetratricopeptide repeat domain 31 Neighboring gene ladybird homeobox 2 Neighboring gene T cell leukemia homeobox 2 Neighboring gene DEAQ-box RNA dependent ATPase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables promoter-specific chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of PRC1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polycomb group RING finger protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947501.1 Reference mCavPor4.1

    Range
    28205521..28207909 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003468973.5 → XP_003469021.1  polycomb group RING finger protein 1 isoform X1

    UniProtKB/TrEMBL
    H0VM36
    Related
    ENSCPOP00000011453.2
    Conserved Domains (2) summary
    pfam00097
    Location:47 → 85
    zf-C3HC4; Zinc finger, C3HC4 type (RING finger)
    pfam16207
    Location:177 → 253
    RAWUL; RAWUL domain RING finger- and WD40-associated ubiquitin-like

  2. XM_063229623.1 → XP_063085693.1  polycomb group RING finger protein 1 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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