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Pirt phosphoinositide interacting regulator of transient receptor potential channels [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100724638, updated on 8-Mar-2024

Summary

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Gene symbol
Pirt
Gene description
phosphoinositide interacting regulator of transient receptor potential channels
See related
Ensembl:ENSCPOG00000034574
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Orthologs
human mouse all
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Genomic context

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See Pirt in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947515.1 (39960946..39976278, complement)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176358.1 (6025207..6040712)

NW_026947515.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134474380 Neighboring gene uncharacterized LOC134474452 Neighboring gene transmembrane protein 238 like Neighboring gene uncharacterized LOC134474454 Neighboring gene uncharacterized LOC134474453 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol bisphosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane transporter binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cation channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphoinositide-interacting protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947515.1 Reference mCavPor4.1

    Range
    39960946..39976278 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013148684.3 → XP_013004138.1  phosphoinositide-interacting protein

    See identical proteins and their annotated locations for XP_013004138.1

    UniProtKB/TrEMBL
    A0A286XGY3
    Conserved Domains (1) summary
    pfam15099
    Location:5 → 135
    PIRT; Phosphoinositide-interacting protein family

  2. XM_013148683.3 → XP_013004137.1  phosphoinositide-interacting protein

    See identical proteins and their annotated locations for XP_013004137.1

    UniProtKB/TrEMBL
    A0A286XGY3
    Conserved Domains (1) summary
    pfam15099
    Location:5 → 135
    PIRT; Phosphoinositide-interacting protein family

  3. XM_023563532.2 → XP_023419300.1  phosphoinositide-interacting protein

    UniProtKB/TrEMBL
    A0A286XGY3
    Related
    ENSCPOP00000024621.1
    Conserved Domains (1) summary
    pfam15099
    Location:5 → 135
    PIRT; Phosphoinositide-interacting protein family
Nucleotide Protein
Heading Accession and Version

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