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Stambpl1 STAM binding protein like 1 [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100720263, updated on 8-Mar-2024

Summary

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Gene symbol
Stambpl1
Gene description
STAM binding protein like 1
See related
Ensembl:ENSCPOG00000011578
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Orthologs
human mouse all
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Genomic context

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See Stambpl1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947511.1 (9744731..9787191, complement)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176404.1 (1432859..1475530)

NW_026947511.1Genomic Context describing neighboring genes Neighboring gene cyclic AMP-dependent transcription factor ATF-3-like Neighboring gene actin alpha 2, smooth muscle Neighboring gene ankyrin repeat domain 22 Neighboring gene lipase family member M Neighboring gene Y-box-binding protein 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K63-linked deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal-dependent deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein K63-linked deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AMSH-like protease

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947511.1 Reference mCavPor4.1

    Range
    9744731..9787191 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003473795.5 → XP_003473843.1  AMSH-like protease isoform X1

    See identical proteins and their annotated locations for XP_003473843.1

    UniProtKB/TrEMBL
    H0VJH8
    Related
    ENSCPOP00000010415.2
    Conserved Domains (3) summary
    cd08066
    Location:266 → 436
    MPN_AMSH_like; Mov34/MPN/PAD-1 family
    pfam08969
    Location:28 → 129
    USP8_dimer; USP8 dimerization domain
    cl20817
    Location:120 → 198
    GBP_C; Guanylate-binding protein, C-terminal domain

  2. XM_005005292.4 → XP_005005349.1  AMSH-like protease isoform X1

    See identical proteins and their annotated locations for XP_005005349.1

    UniProtKB/TrEMBL
    H0VJH8
    Conserved Domains (3) summary
    cd08066
    Location:266 → 436
    MPN_AMSH_like; Mov34/MPN/PAD-1 family
    pfam08969
    Location:28 → 129
    USP8_dimer; USP8 dimerization domain
    cl20817
    Location:120 → 198
    GBP_C; Guanylate-binding protein, C-terminal domain

  3. XM_005005291.4 → XP_005005348.1  AMSH-like protease isoform X1

    See identical proteins and their annotated locations for XP_005005348.1

    UniProtKB/TrEMBL
    H0VJH8
    Conserved Domains (3) summary
    cd08066
    Location:266 → 436
    MPN_AMSH_like; Mov34/MPN/PAD-1 family
    pfam08969
    Location:28 → 129
    USP8_dimer; USP8 dimerization domain
    cl20817
    Location:120 → 198
    GBP_C; Guanylate-binding protein, C-terminal domain

  4. XM_063239489.1 → XP_063095559.1  AMSH-like protease isoform X2

Nucleotide Protein
Heading Accession and Version

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