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med11 mediator complex subunit 11 [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100699247, updated on 8-Mar-2024

Summary

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Gene symbol
med11
Gene description
mediator complex subunit 11
See related
Ensembl:ENSONIG00000030964
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Expression
Ubiquitous expression in ovary (RPKM 29.5), testis (RPKM 20.7) and 9 other tissues See more
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG3
Exon count:
3
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG3 NC_031967.2 (2905550..2908897, complement)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG3a NC_031967.1 (7155413..7158206, complement)

Linkage Group LG3 - NC_031967.2Genomic Context describing neighboring genes Neighboring gene myotubularin related protein 1a Neighboring gene CD99 molecule-like 2 Neighboring gene proline, glutamate and leucine rich protein 1 Neighboring gene arachidonate 12-lipoxygenase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Oreochromis niloticus Transcriptome or Gene expression Oreochromis niloticus Transcriptome or Gene expression
  • Description: Oreochromis niloticus (Nile Tilapia) RNA sequencing from multiple tissues.
  • BioProject: PRJNA78915
  • Analysis date: Fri Dec 29 00:23:36 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mediator of RNA polymerase II transcription subunit 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031967.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    2905550..2908897 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003458400.4 → XP_003458448.1  mediator of RNA polymerase II transcription subunit 11

    UniProtKB/TrEMBL
    A0A669F122
    Related
    ENSONIP00000079115.1, ENSONIT00000051611.1
    Conserved Domains (1) summary
    pfam10280
    Location:3 → 107
    Med11; Mediator complex protein
Nucleotide Protein
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Gene LinkOut

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