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mapk8ip1b mitogen-activated protein kinase 8 interacting protein 1b [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100698957, updated on 8-Mar-2024

Summary

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Gene symbol
mapk8ip1b
Gene description
mitogen-activated protein kinase 8 interacting protein 1b
See related
Ensembl:ENSONIG00000036840
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Also known as
mapk8ip1
Expression
Biased expression in brain (RPKM 18.7), whole embryo (RPKM 4.1) and 2 other tissues See more
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG1
Exon count:
14
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG1 NC_031965.2 (8962870..9015524, complement)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG1 NC_031965.1 (6555300..6607970, complement)

Linkage Group LG1 - NC_031965.2Genomic Context describing neighboring genes Neighboring gene cugbp, Elav-like family member 1 Neighboring gene N-acetyllactosaminide alpha-1,3-galactosyltransferase-like Neighboring gene malignant fibrous histiocytoma-amplified sequence 1 homolog Neighboring gene guanylyl cyclase-activating protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Oreochromis niloticus Transcriptome or Gene expression Oreochromis niloticus Transcriptome or Gene expression
  • Description: Oreochromis niloticus (Nile Tilapia) RNA sequencing from multiple tissues.
  • BioProject: PRJNA78915
  • Analysis date: Fri Dec 29 00:23:36 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of JNK cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-Jun-amino-terminal kinase-interacting protein 1
Names
mitogen-activated protein kinase 8 interacting protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031965.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    8962870..9015524 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019350347.2 → XP_019205892.1  C-Jun-amino-terminal kinase-interacting protein 1 isoform X3

  2. XM_005455738.4 → XP_005455795.1  C-Jun-amino-terminal kinase-interacting protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A669DHG5
    Related
    ENSONIP00000058340.1, ENSONIT00000035498.1
    Conserved Domains (2) summary
    cd11943
    Location:565 → 619
    SH3_JIP1; Src homology 3 domain of JNK-interacting protein 1
    cd01212
    Location:634 → 782
    PTB_JIP; JNK-interacting protein-like (JIP) Phosphotyrosine-binding (PTB) domain

  3. XM_013274755.2 → XP_013130209.2  C-Jun-amino-terminal kinase-interacting protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A669C3R9
    Related
    ENSONIP00000042432.1, ENSONIT00000065373.1
    Conserved Domains (2) summary
    cd11943
    Location:626 → 680
    SH3_JIP1; Src homology 3 domain of JNK-interacting protein 1
    cd01212
    Location:695 → 843
    PTB_JIP; JNK-interacting protein-like (JIP) Phosphotyrosine-binding (PTB) domain

  4. XM_025899787.1 → XP_025755572.1  C-Jun-amino-terminal kinase-interacting protein 1 isoform X4

Nucleotide Protein
Heading Accession and Version

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