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rab2a RAB2A, member RAS oncogene family [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100692204, updated on 8-Mar-2024

Summary

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Gene symbol
rab2a
Gene description
RAB2A, member RAS oncogene family
See related
Ensembl:ENSONIG00000034587
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Expression
Ubiquitous expression in brain (RPKM 78.5), eye (RPKM 47.2) and 9 other tissues See more
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG18
Exon count:
8
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG18 NC_031982.2 (2265767..2295829, complement)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG18 NC_031982.1 (2183341..2213605, complement)

Linkage Group LG18 - NC_031982.2Genomic Context describing neighboring genes Neighboring gene polypyrimidine tract-binding protein 2 Neighboring gene chromodomain helicase DNA binding protein 7 Neighboring gene carbonic anhydrase VIII Neighboring gene thymocyte selection-associated high mobility group box

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Oreochromis niloticus Transcriptome or Gene expression Oreochromis niloticus Transcriptome or Gene expression
  • Description: Oreochromis niloticus (Nile Tilapia) RNA sequencing from multiple tissues.
  • BioProject: PRJNA78915
  • Analysis date: Fri Dec 29 00:23:36 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-2A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031982.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    2265767..2295829 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003453160.4 → XP_003453208.1  ras-related protein Rab-2A

    UniProtKB/TrEMBL
    A0A669AUV7, A0A669BR29
    Related
    ENSONIP00000037977.1, ENSONIT00000059157.1
    Conserved Domains (1) summary
    PLN03108
    Location:1 → 212
    PLN03108; Rab family protein; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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