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ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif 9 [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100675750, updated on 11-Apr-2024

Summary

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Gene symbol
ADAMTS9
Gene description
ADAM metallopeptidase with thrombospondin type 1 motif 9
See related
EnsemblRapid:ENSLAFG00000011498
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 22
Exon count:
40
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 22 NC_087363.1 (7098698..7295114)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573432.1 (1746347..1939803)

Chromosome 22 - NC_087363.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135228444 Neighboring gene signal peptide, CUB and EGF-like domain-containing protein 2 Neighboring gene serine/arginine-rich splicing factor 6-like Neighboring gene prickle planar cell polarity protein 2 Neighboring gene histone H3.3C-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
A disintegrin and metalloproteinase with thrombospondin motifs 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087363.1 Reference mLoxAfr1.hap2

    Range
    7098698..7295114
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010589691.2 → XP_010587993.2  A disintegrin and metalloproteinase with thrombospondin motifs 9 isoform X1

  2. XM_003410031.3 → XP_003410079.2  A disintegrin and metalloproteinase with thrombospondin motifs 9 isoform X2

    Related
    ENSLAFP00000009614.5, ENSLAFT00000011508.5
Nucleotide Protein
Heading Accession and Version

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