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PDCL phosducin like [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100669933, updated on 6-Jun-2024

Summary

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Gene symbol
PDCL
Gene description
phosducin like
See related
EnsemblRapid:ENSLAFG00000045266
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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See PDCL in Genome Data Viewer
Location:
chromosome: 9
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 9 NC_087350.1 (52562977..52571724)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573426.1 (35213822..35224320)

Chromosome 9 - NC_087350.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain containing 6 Neighboring gene ring finger and CCCH-type domains 2 Neighboring gene small nucleolar RNA SNORD90 Neighboring gene olfactory receptor 1K1 Neighboring gene olfactory receptor 5C1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in heterotrimeric G-protein complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosducin-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087350.1 Reference mLoxAfr1.hap2

    Range
    52562977..52571724
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023544958.2 → XP_023400726.1  phosducin-like protein isoform X1

    UniProtKB/TrEMBL
    G3T8F8
    Conserved Domains (1) summary
    pfam02114
    Location:44 → 320
    Phosducin

  2. XM_023544959.2 → XP_023400727.1  phosducin-like protein isoform X2

    UniProtKB/TrEMBL
    G3T8F8
    Related
    ENSLAFP00000033217.1, ENSLAFT00000050199.1
    Conserved Domains (1) summary
    pfam02114
    Location:38 → 314
    Phosducin

  3. XM_010587652.3 → XP_010585954.1  phosducin-like protein isoform X3

    UniProtKB/TrEMBL
    G3T8F8
    Related
    ENSLAFP00000048921.1, ENSLAFT00000051134.1
    Conserved Domains (2) summary
    cd02987
    Location:57 → 278
    Phd_like_Phd; Phosducin (Phd)-like family, Phd subfamily; Phd is a cytosolic regulator of G protein functions. It specifically binds G protein betagamma (Gbg)-subunits with high affinity, resulting in the solubilization of Gbg from the plasma membrane. This impedes ...
    pfam02114
    Location:44 → 305
    Phosducin; Phosducin
Nucleotide Protein
Heading Accession and Version

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