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CBLN1 cerebellin 1 precursor [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100669776, updated on 11-Apr-2024

Summary

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Gene symbol
CBLN1
Gene description
cerebellin 1 precursor
See related
EnsemblRapid:ENSLAFG00000026685
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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See CBLN1 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 21 NC_087362.1 (77300115..77303197, complement)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573463.1 (18098638..18101771, complement)

Chromosome 21 - NC_087362.1Genomic Context describing neighboring genes Neighboring gene siah E3 ubiquitin protein ligase 1 Neighboring gene NEDD4 binding protein 1 Neighboring gene chromosome 21 C16orf78 homolog Neighboring gene zinc finger protein 423 Neighboring gene mitochondrial import inner membrane translocase subunit TIM14-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maintenance of synapse structure IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in glutamatergic synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic cleft IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cerebellin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087362.1 Reference mLoxAfr1.hap2

    Range
    77300115..77303197 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003416347.4 → XP_003416395.1  cerebellin-1

    UniProtKB/TrEMBL
    G3UAV7, G3UCD9
    Related
    ENSLAFP00000024965.1, ENSLAFT00000035807.2
    Conserved Domains (1) summary
    smart00110
    Location:55 → 193
    C1Q; Complement component C1q domain
Nucleotide Protein
Heading Accession and Version

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